CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005444
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Membrane protein insertase YidC 
Protein Synonyms/Alias
 Foldase YidC; Inner membrane protein YidC; Membrane integrase YidC; Oxa1Ec 
Gene Name
 yidC 
Gene Synonyms/Alias
 b3705; JW3683 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
234DEKYEKYKFDTIADNacetylation[1]
389KMRMLQPKIQAMRERacetylation[1]
401RERLGDDKQRISQEMacetylation[1]
413QEMMALYKAEKVNPLacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Inner membrane protein required for the insertion and/or proper folding and/or complex formation of integral inner membrane proteins. Involved in integration of membrane proteins that insert dependently and independently of the Sec translocase complex, as well as at least 2 lipoproteins. Its own insertion requires SRP and is Sec translocase-dependent. Essential for the integration of Sec-dependent subunit a of the F(0)ATP synthase, FtsQ and SecE proteins and for Sec-independent subunit c of the F(0)ATP synthase, M13 phage procoat and the N-terminus of leader peptidase Lep. Probably interacts directly with Sec-independent substrates. Sec-dependent protein FtsQ interacts first with SecY then subsequently with YidC. Sec-dependent LacY and MalF require YidC to acquire tertiary structure and stability, a chaperone-like function, but not for membrane insertion. Stable maltose transport copmplex formation (MalFGK(2)) also requires YidC. Partially complements a Streptococcus mutans yidC2 disruption mutant. 
Sequence Annotation
 REGION 24 264 Can be removed without causing lethality,
 REGION 215 265 Interacts with SecF; not required for
 REGION 265 346 Required for Sec-dependent and Sec-
 REGION 527 548 Can be removed without causing lethality,  
Keyword
 3D-structure; Cell inner membrane; Cell membrane; Chaperone; Complete proteome; Membrane; Protein transport; Reference proteome; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 548 AA 
Protein Sequence
MDSQRNLLVI ALLFVSFMIW QAWEQDKNPQ PQAQQTTQTT TTAAGSAADQ GVPASGQGKL 60
ISVKTDVLDL TINTRGGDVE QALLPAYPKE LNSTQPFQLL ETSPQFIYQA QSGLTGRDGP 120
DNPANGPRPL YNVEKDAYVL AEGQNELQVP MTYTDAAGNT FTKTFVLKRG DYAVNVNYNV 180
QNAGEKPLEI SSFGQLKQSI TLPPHLDTGS SNFALHTFRG AAYSTPDEKY EKYKFDTIAD 240
NENLNISSKG GWVAMLQQYF ATAWIPHNDG TNNFYTANLG NGIAAIGYKS QPVLVQPGQT 300
GAMNSTLWVG PEIQDKMAAV APHLDLTVDY GWLWFISQPL FKLLKWIHSF VGNWGFSIII 360
ITFIVRGIMY PLTKAQYTSM AKMRMLQPKI QAMRERLGDD KQRISQEMMA LYKAEKVNPL 420
GGCFPLLIQM PIFLALYYML MGSVELRQAP FALWIHDLSA QDPYYILPIL MGVTMFFIQK 480
MSPTTVTDPM QQKIMTFMPV IFTVFFLWFP SGLVLYYIVS NLVTIIQQQL IYRGLEKRGL 540
HSREKKKS 548 
Gene Ontology
 GO:0016021; C:integral to membrane; IDA:UniProtKB.
 GO:0005886; C:plasma membrane; IDA:UniProtKB.
 GO:0032977; F:membrane insertase activity; IMP:EcoliWiki.
 GO:0006461; P:protein complex assembly; IMP:UniProtKB.
 GO:0006457; P:protein folding; IMP:UniProtKB.
 GO:0051205; P:protein insertion into membrane; IDA:EcoliWiki. 
Interpro
 IPR019998; Membr_insert_YidC.
 IPR001708; Membrane_insert_OXA1/ALB3/YidC. 
Pfam
 PF02096; 60KD_IMP 
SMART
  
PROSITE
  
PRINTS
 PR00701; 60KDINNERMP.
 PR01900; YIDCPROTEIN.