CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-015992
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Vacuolar protein sorting-associated protein 13B 
Protein Synonyms/Alias
 Cohen syndrome protein 1 
Gene Name
 VPS13B 
Gene Synonyms/Alias
 CHS1; COH1; KIAA0532 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
1777GIGSDSVKIRIVQIEubiquitination[1]
2269VEKNQTFKSEQSSDDubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 May be involved in protein sorting in post Golgi membrane traffic (By similarity). 
Sequence Annotation
 MOD_RES 999 999 Phosphoserine (By similarity).
 MOD_RES 1002 1002 Phosphoserine (By similarity).  
Keyword
 Alternative splicing; Complete proteome; Disease mutation; Obesity; Phosphoprotein; Polymorphism; Protein transport; Reference proteome; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 4022 AA 
Protein Sequence
MLESYVTPIL MSYVNRYIKN LKPSDLQLSL WGGDVVLSKL ELKLDVLEQE LKLPFTFLSG 60
HIHELRIHVP WTKLGSEPVV ITINTMECIL KLKDGIQDDH ESCGSNSTNR STAESTKSSI 120
KPRRMQQAAP TDPDLPPGYV QSLIRRVVNN VNIVINNLIL KYVEDDIVLS VNITSAECYT 180
VGELWDRAFM DISATDLVLR KVINFSDCTV CLDKRNASGK IEFYQDPLLY KCSFRTRLHF 240
TYENLNSKMP SVIKIHTLVE SLKLSITDQQ LPMFIRIMQL GIALYYGEIG NFKEGEIEDL 300
TCHNKDMLGN ITGSEDETRI DMQYPAQHKG QELYSQQDEE QPQGWVSWAW SFVPAIVSYD 360
DGEEDFVGND PASTMHQQKA QTLKDPIVSI GFYCTKATVT FKLTEMQVES SYYSPQKVKS 420
KEVLCWEQEG TTVEALMMGE PFFDCQIGFV GCRAMCLKGI MGVKDFEENM NRSETEACFF 480
ICGDNLSTKG FTYLTNSLFD YRSPENNGTR AEFILDSTHH KETYTEIAGM QRFGAFYMDY 540
LYTMENTSGK GSTNQQDFSS GKSEDLGTVQ EKSTKSLVIG PLDFRLDSSA VHRILKMIVC 600
ALEHEYEPYS RLKSDIKDEN ETILNPEEVA LLEEYIPTRH TSVTLLKCTC TISMAEFNLL 660
DHLLPVIMGE KNSSNFMNTT NFQSLRPLPS IRILVDKINL EHSVPMYAEQ LVHVVSSLTQ 720
PSDNLLHYCY VHCYLKIFGF QAGLTSLDCS GSYCLPVPVI PSFSTALYGK LLKLPTCWTK 780
RSQIAITEGI FELPNLTIQA TRAQTLLLQA IYQSWSHLGN VSSSAVIEAL INEIFLSIGV 840
KSKNPLPTLE GSIQNVELKY CSTSLVKCAS GTMGSIKICA KAPVDSGKEK LIPLLQGPSD 900
TKDLHSTKWL NESRKPESLL APDLMAFTIQ VPQYIDYCHN SGAVLLCSIQ GLAVNIDPIL 960
YTWLIYQPQK RTSRHMQQQP VVAVPLVMPV CRRKEDEVSI GSAPLAKQQS YQASEYASSP 1020
VKTKTVTESR PLSVPVKAML NISESCRSPE ERMKEFIGIV WNAVKHLTLQ LEVQSCCVFI 1080
PNDSLPSPST IVSGDIPGTV RSWYHGQTSM PGTLVLCLPQ IKIISAGHKY MEPLQEIPFV 1140
IPRPILEEGD AFPWTISLHN FSIYTLLGKQ VTLCLVEPMG CTSTLAVTSQ KLLATGPDTR 1200
HSFVVCLHVD LESLEIKCSN PQVQLFYELT DIMNKVWNKI QKRGNLNLSP TSPETMAGPV 1260
PTSPVRSSIG TAPPDTSTCS PSADIGTTTE GDSIQAGEES PFSDSVTLEQ TTSNIGGTSG 1320
RVSLWMQWVL PKITIKLFAP DPENKGTEVC MVSELEDLSA SIDVQDVYTK VKCKIESFNI 1380
DHYRSRPGEG WQSGHFEGVF LQCKEKSVTT TKLLDGTHQQ HGFLSLTYTK AVTKNVRHKL 1440
TSRNERRSFH KLSEGLMDGS PHFLHEILLS AQAFDIVLYF PLLNAIASIF QAKLPKTQKE 1500
KRKSPGQPMR THTLTSRNLP LIYVNTSVIR IFIPKTEEMQ PTVEANQAAK EDTVVLKIGS 1560
VAMAPQADNP LGRSVLRKDI YQRALNLGIL RDPGSEIEDR QYQIDLQSIN IGTAQWHQLK 1620
PEKESVSGGV VTETERNSQN PALEWNMASS IRRHQERRAI LTPVLTDFSV RITGAPAVIF 1680
TKVVSPENLH TEEILVCGHS LEVNITTNLD FFLSVAQVQL LHQLIVANMT GLEPSNKAAE 1740
ISKQEQKKVD IFDGGMAETS SRYSGAQDSG IGSDSVKIRI VQIEQHSGAS QHRIARPSRQ 1800
SSIVKNLNFI PFDIFITASR ISLMTYSCMA LSKSKSQEQK NNEKTDKSSL NLPEVDSDVA 1860
KPNQACISTV TAEDLLRSSI SFPSGKKIGV LSLESLHAST RSSARQALGI TIVRQPGRRG 1920
TGDLQLEPFL YFIVSQPSLL LSCHHRKQRV EVSIFDAVLK GVASDYKCID PGKTLPEALD 1980
YCTVWLQTVP GEIDSKSGIP PSFITLQIKD FLNGPADVNL DISKPLKANL SFTKLDQINL 2040
FLKKIKNAHS LAHSEETSAM SNTMVNKDDL PVSKYYRGKL SKPKIHGDGV QKISAQENMW 2100
RAVSCFQKIS VQTTQIVISM ETVPHTSKPC LLASLSNLNG SLSVKATQKV PGIILGSSFL 2160
LSINDFLLKT SLKERSRILI GPCCATANLE AKWCKHSGNP GPEQSIPKIS IDLRGGLLQV 2220
FWGQEHLNCL VLLHELLNGY LNEEGNFEVQ VSEPVPQMSS PVEKNQTFKS EQSSDDLRTG 2280
LFQYVQDAES LKLPGVYEVL FYNETEDCPG MMLWRYPEPR VLTLVRITPV PFNTTEDPDI 2340
STADLGDVLQ VPCSLEYWDE LQKVFVAFRE FNLSESKVCE LQLPDINLVN DQKKLVSSDL 2400
WRIVLNSSQN GADDQSSASE SGSQSTCDPL VTPTALAACT RVDSCFTPWF VPSLCVSFQF 2460
AHLEFHLCHH LDQLGTAAPQ YLQPFVSDRN MPSELEYMIV SFREPHMYLR QWNNGSVCQE 2520
IQFLAQADCK LLECRNVTMQ SVVKPFSIFG QMAVSSDVVE KLLDCTVIVD SVFVNLGQHV 2580
VHSLNTAIQA WQQNKCPEVE ELVFSHFVIC NDTQETLRFG QVDTDENILL ASLHSHQYSW 2640
RSHKSPQLLH ICIEGWGNWR WSEPFSVDHA GTFIRTIQYR GRTASLIIKV QQLNGVQKQI 2700
IICGRQIICS YLSQSIELKV VQHYIGQDGQ AVVREHFDCL TAKQKLPSYI LENNELTELC 2760
VKAKGDEDWS RDVCLESKAP EYSIVIQVPS SNSSIIYVWC TVLTLEPNSQ VQQRMIVFSP 2820
LFIMRSHLPD PIIIHLEKRS LGLSETQIIP GKGQEKPLQN IEPDLVHHLT FQAREEYDPS 2880
DCAVPISTSL IKQIATKVHP GGTVNQILDE FYGPEKSLQP IWPYNKKDSD RNEQLSQWDS 2940
PMRVKLSIWK PYVRTLLIEL LPWALLINES KWDLWLFEGE KIVLQVPAGK IIIPPNFQEA 3000
FQIGIYWANT NTVHKSVAIK LVHNLTSPKW KDGGNGEVVT LDEEAFVDTE IRLGAFPGHQ 3060
KLCQFCISSM VQQGIQIIQI EDKTTIINNT PYQIFYKPQL SVCNPHSGKE YFRVPDSATF 3120
SICPGGEQPA MKSSSLPCWD LMPDISQSVL DASLLQKQIM LGFSPAPGAD SSQCWSLPAI 3180
VRPEFPRQSV AVPLGNFREN GFCTRAIVLT YQEHLGVTYL TLSEDPSPRV IIHNRCPVKM 3240
LIKENIKDIP KFEVYCKKIP SECSIHHELY HQISSYPDCK TKDLLPSLLL RVEPLDEVTT 3300
EWSDAIDINS QGTQVVFLTG FGYVYVDVVH QCGTVFITVA PEGKAGPILT NTNRAPEKIV 3360
TFKMFITQLS LAVFDDLTHH KASAELLRLT LDNIFLCVAP GAGPLPGEEP VAALFELYCV 3420
EICCGDLQLD NQLYNKSNFH FAVLVCQGEK AEPIQCSKMQ SLLISNKELE EYKEKCFIKL 3480
CITLNEGKSI LCDINEFSFE LKPARLYVED TFVYYIKTLF DTYLPNSRLA GHSTHLSGGK 3540
QVLPMQVTQH ARALVNPVKL RKLVIQPVNL LVSIHASLKL YIASDHTPLS FSVFERGPIF 3600
TTARQLVHAL AMHYAAGALF RAGWVVGSLD ILGSPASLVR SIGNGVADFF RLPYEGLTRG 3660
PGAFVSGVSR GTTSFVKHIS KGTLTSITNL ATSLARNMDR LSLDEEHYNR QEEWRRQLPE 3720
SLGEGLRQGL SRLGISLLGA IAGIVDQPMQ NFQKTSEAQA SAGHKAKGVI SGVGKGIMGV 3780
FTKPIGGAAE LVSQTGYGIL HGAGLSQLPK QRHQPSDLHA DQAPNSHVKY VWKMLQSLGR 3840
PEVHMALDVV LVRGSGQEHE GCLLLTSEVL FVVSVSEDTQ QQAFPVTEID CAQDSKQNNL 3900
LTVQLKQPRV ACDVEVDGVR ERLSEQQYNR LVDYITKTSC HLAPSCSSMQ IPCPVVAAEP 3960
PPSTVKTYHY LVDPHFAQVF LSKFTMVKNK ALRKGFP 3997 
Gene Ontology
 GO:0015031; P:protein transport; IEA:UniProtKB-KW. 
Interpro
 IPR015412; Autophagy-rel_C.
 IPR026847; VPS13.
 IPR026854; VPS13A_N.
 IPR009543; VPSAP_dom. 
Pfam
 PF09333; ATG_C
 PF12624; Chorein_N
 PF06650; DUF1162 
SMART
  
PROSITE
  
PRINTS