CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004094
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial 
Protein Synonyms/Alias
 Succinyl-CoA synthetase subunit alpha; SCS-alpha 
Gene Name
 Suclg1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
48GSYTASRKNIYIDKNacetylation[1]
54RKNIYIDKNTKVICQacetylation[1]
57IYIDKNTKVICQGFTacetylation[1]
66ICQGFTGKQGTFHSQacetylation[1]
81QALEYGTKLVGGTTPacetylation[1]
90VGGTTPGKGGKKHLGacetylation[1]
105LPVFNTVKEAKEKTGacetylation[1]
108FNTVKEAKEKTGATAacetylation[1]
156QQDMVRVKHKLTRQGacetylation[1]
192IMPGHIHKKGRIGIVacetylation[1]
271ENAAEFLKEHNSGPKacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 Catalyzes the ATP- or GTP-dependent ligation of succinate and CoA to form succinyl-CoA. The nature of the beta subunit determines the nucleotide specificity (By similarity). 
Sequence Annotation
 ACT_SITE 299 299 Tele-phosphohistidine intermediate.
 MOD_RES 54 54 N6-acetyllysine (By similarity).
 CROSSLNK 280 280 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 Acetylation; Complete proteome; GTP-binding; Isopeptide bond; Ligase; Mitochondrion; Nucleotide-binding; Reference proteome; Transit peptide; Tricarboxylic acid cycle; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 346 AA 
Protein Sequence
MTAAVVAAAA TATMVSGSSG LAAARLLSRT FLLQQNGIRH GSYTASRKNI YIDKNTKVIC 60
QGFTGKQGTF HSQQALEYGT KLVGGTTPGK GGKKHLGLPV FNTVKEAKEK TGATASVIYV 120
PPPFAAAAIN EAIDAEIPLV VCITEGIPQQ DMVRVKHKLT RQGKTRLIGP NCPGIINPGE 180
CKIGIMPGHI HKKGRIGIVS RSGTLTYEAV HQTTQVGLGQ SLCIGIGGDP FNGTNFIDCL 240
DVFLKDPATE GIVLIGEIGG HAEENAAEFL KEHNSGPKAK PVVSFIAGIT APPGRRMGHA 300
GAIIAGGKGG AKEKISALQS AGVIVSMSPA QLGTCMYKEF EKRKML 346 
Gene Ontology
 GO:0005743; C:mitochondrial inner membrane; IEA:Compara.
 GO:0005886; C:plasma membrane; IEA:Compara.
 GO:0045244; C:succinate-CoA ligase complex (GDP-forming); IDA:RGD.
 GO:0003878; F:ATP citrate synthase activity; IEA:InterPro.
 GO:0048037; F:cofactor binding; IEA:InterPro.
 GO:0019003; F:GDP binding; IDA:RGD.
 GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
 GO:0046982; F:protein heterodimerization activity; IDA:RGD.
 GO:0004775; F:succinate-CoA ligase (ADP-forming) activity; IDA:RGD.
 GO:0004776; F:succinate-CoA ligase (GDP-forming) activity; IDA:RGD.
 GO:0006105; P:succinate metabolic process; IDA:RGD.
 GO:0006104; P:succinyl-CoA metabolic process; IDA:RGD.
 GO:0006099; P:tricarboxylic acid cycle; IDA:RGD. 
Interpro
 IPR017440; Cit_synth/succinyl-CoA_lig_AS.
 IPR003781; CoA-bd.
 IPR005810; CoA_lig_alpha.
 IPR005811; CoA_ligase.
 IPR016040; NAD(P)-bd_dom.
 IPR016102; Succinyl-CoA_synth-like. 
Pfam
 PF02629; CoA_binding
 PF00549; Ligase_CoA 
SMART
 SM00881; CoA_binding 
PROSITE
 PS01216; SUCCINYL_COA_LIG_1
 PS00399; SUCCINYL_COA_LIG_2 
PRINTS
 PR01798; SCOASYNTHASE.