CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-013041
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Trafficking protein particle complex subunit 9 
Protein Synonyms/Alias
 NIK- and IKBKB-binding protein 
Gene Name
 Trappc9 
Gene Synonyms/Alias
 Kiaa1882; Nibp 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
174ATDKSGDKIPLLCVPubiquitination[1]
544LPIVRCVKLLSLPTSubiquitination[2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
 Functions as an activator of NF-kappa-B through increased phosphorylation of the IKK complex. May function in neuronal cells differentiation. May play a role in vesicular transport from endoplasmic reticulum to Golgi. 
Sequence Annotation
  
Keyword
 Alternative splicing; Complete proteome; Cytoplasm; Differentiation; Endoplasmic reticulum; Golgi apparatus; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1148 AA 
Protein Sequence
MSVPDYMQCA EDHQTLLVVV QAVGIVSEEN FFRIYKRICS VSQLSVRDTQ RALFIRYRHH 60
YPPENNEWGD FQTHRKVVGL ITITDCFSPK DWPQTFEKFH VQKEIYGSTL YDSRLFVFGL 120
QGDVAEQPRP DVAFYPNYDD CDSVEKRIED FIESLFIVLE SKRLDRATDK SGDKIPLLCV 180
PFEKKDFVGL DTDSRHYKKR CQGRMRKHVG DLCLQAGMLQ DALVHYHMSV ELLRSVNDFL 240
WLGAALEGLC SASVIYHYPG GTGGKTGARR LQGSSLPSEA ANRHRPGAQE VLIDPGALTT 300
NGINPDTSTE IGRAKNCLSP EDIIDKYKEA ISYYSKYKNA GVIELEACVK AVRVLAIQKR 360
GMEASEFLQN AVYINLRQLS EEEKIQRYSI LSELYELIGF HRKSAFFKRV AAMQCVAPSI 420
AEPGWRACYK LLLETLPGYS LSLDPKDFSK GTHRGWAAVQ MRLLHELVYA SRRMGNPALS 480
VRHLSFLLQT MLDFLSDQEK KDVTQSLENY TAKCPGTMEP ITLPDGLTLP PVPFTKLPIV 540
RCVKLLSLPT SLRPHKVKSL LGQSMSTKSP FIYSPIIAHN RGEERNKKID FQWVQGDVCE 600
VQLMVYNPMP FELRVENMGL LTSGVEFESL PAALSLPAES GLYPVTLVGV PQTTGMITVN 660
GYHTTVFGVF SDCLLDNLPG LKTGGSTVEV IPALPRLQIS TSLPRSARSL QPSAGDEIAT 720
NVSVQLYNGE TQQLAVTLEN IGLEPLEQLE VTSKLLTTKE KLYGDFLSWK LEETLAQFPL 780
QPGKVATFTI NIKAKLDFSC QENLLQDLSD DGISVSGFPL SSPFRQVVRP RVESRPTNPS 840
EGSKTGDLGH VKTLEAVLNF KYSGGPGHVE GYYRNLSLGL HVEVEPSVFF TRVSTLPATS 900
TRQCHLLLDV FNSTEHELTV CARNNSELVL HASECQRMAI QVDKFNFESV PESPGEKGHF 960
ANLKQLEEER QEARGLEISS KLDIRWRIPS LKRSGEASVE GLLNQLILEH LQLAPLQWDV 1020
LVDGQPCDCE VAAACQVGDP VRLEVRLTNR SPRSVGPFAL TVVPFQDHQN GVHNYDLHDV 1080
ISFVGSSTFY LDTVQPSGQS TCLGALLFLY TGDFFLNIRF HEDCKSKELP PSWVCLPSVH 1140
VRALGAQA 1148 
Gene Ontology
 GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.
 GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
 GO:0030154; P:cell differentiation; IEA:UniProtKB-KW. 
Interpro
 IPR013935; TRAPP_II_complex_Trs120. 
Pfam
 PF08626; TRAPPC9-Trs120 
SMART
  
PROSITE
  
PRINTS