CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016370
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Isopentenyl-diphosphate Delta-isomerase 2 
Protein Synonyms/Alias
 Isopentenyl pyrophosphate isomerase 2; IPP isomerase 2; IPPI2 
Gene Name
 Idi2 
Gene Synonyms/Alias
 Gm9745 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
157GYLLLVRKDLMLNPDacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP) (By similarity). 
Sequence Annotation
 DOMAIN 49 199 Nudix hydrolase.
 MOTIF 225 227 Microbody targeting signal (Potential).
 ACT_SITE 86 86 By similarity.
 ACT_SITE 148 148 By similarity.
 METAL 40 40 Magnesium (By similarity).
 METAL 51 51 Magnesium (By similarity).
 METAL 146 146 Magnesium (By similarity).
 METAL 148 148 Magnesium (By similarity).
 BINDING 36 36 Substrate (By similarity).
 BINDING 70 70 Substrate (By similarity).
 BINDING 74 74 Substrate (By similarity).
 BINDING 87 87 Substrate (By similarity).  
Keyword
 Cholesterol biosynthesis; Cholesterol metabolism; Complete proteome; Isomerase; Isoprene biosynthesis; Lipid biosynthesis; Lipid metabolism; Magnesium; Metal-binding; Peroxisome; Reference proteome; Steroid biosynthesis; Steroid metabolism; Sterol biosynthesis; Sterol metabolism. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 227 AA 
Protein Sequence
MFQASKTHLD ELQLKRLEEM CIVIDKQDQI IGADTKKNCH LMENINKGLL HRAFSVVLFN 60
MKNELLVQQR ADAKYTFPGH FTDSCSSHPL YVPEELEEKD ALGVRRAALR RLQAELGISQ 120
DQISIKDIIF MTRKYHKCQS DAIWGEHEIG YLLLVRKDLM LNPDTREVRR CCYMSQKDVQ 180
ELLDREARGE EKITPWFRSM VEDFLFSWWP HLEDVSSFVE PDKIYGL 227 
Gene Ontology
 GO:0005777; C:peroxisome; IEA:UniProtKB-SubCell.
 GO:0016787; F:hydrolase activity; IEA:InterPro.
 GO:0004452; F:isopentenyl-diphosphate delta-isomerase activity; IEA:EC.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0006695; P:cholesterol biosynthetic process; IEA:UniProtKB-KW.
 GO:0050992; P:dimethylallyl diphosphate biosynthetic process; IEA:UniProtKB-UniPathway.
 GO:0008299; P:isoprenoid biosynthetic process; IEA:UniProtKB-KW.
 GO:0045541; P:negative regulation of cholesterol biosynthetic process; IDA:UniProtKB. 
Interpro
 IPR011876; IsopentenylPP_isomerase_typ1.
 IPR000086; NUDIX_hydrolase_dom.
 IPR015797; NUDIX_hydrolase_dom-like. 
Pfam
 PF00293; NUDIX 
SMART
  
PROSITE
 PS51462; NUDIX 
PRINTS