CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008236
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Probable hydrolase NIT3 
Protein Synonyms/Alias
  
Gene Name
 NIT3 
Gene Synonyms/Alias
 YLR351C; L9638.5 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
47MKEQPDTKLVVLPECubiquitination[1]
105TIPELDPKTDKIYNTacetylation[2]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
  
Sequence Annotation
 DOMAIN 11 286 CN hydrolase.
 ACT_SITE 53 53 Proton acceptor (Potential).
 ACT_SITE 128 128 Probable.
 ACT_SITE 169 169 Nucleophile (Probable).
 MOD_RES 34 34 Phosphothreonine.  
Keyword
 3D-structure; Complete proteome; Hydrolase; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 291 AA 
Protein Sequence
MSASKILSQK IKVALVQLSG SSPDKMANLQ RAATFIERAM KEQPDTKLVV LPECFNSPYS 60
TDQFRKYSEV INPKEPSTSV QFLSNLANKF KIILVGGTIP ELDPKTDKIY NTSIIFNEDG 120
KLIDKHRKVH LFDVDIPNGI SFHESETLSP GEKSTTIDTK YGKFGVGICY DMRFPELAML 180
SARKGAFAMI YPSAFNTVTG PLHWHLLARS RAVDNQVYVM LCSPARNLQS SYHAYGHSIV 240
VDPRGKIVAE AGEGEEIIYA ELDPEVIESF RQAVPLTKQR RFDVYSDVNA H 291 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:SGD.
 GO:0016810; F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; ISS:SGD.
 GO:0006807; P:nitrogen compound metabolic process; IEA:InterPro. 
Interpro
 IPR003010; C-N_Hydrolase.
 IPR001110; UPF0012_CS. 
Pfam
 PF00795; CN_hydrolase 
SMART
  
PROSITE
 PS50263; CN_HYDROLASE
 PS01227; UPF0012 
PRINTS