CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-027129
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 TMEM9 domain family, member B, isoform CRA_b 
Protein Synonyms/Alias
 TMEM9B protein; Transmembrane protein 9B; cDNA, FLJ79115, highly similar to Transmembrane protein 9B 
Gene Name
 TMEM9B 
Gene Synonyms/Alias
 hCG_23891 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
97SRANVLNKVEYAQQRubiquitination[1, 2, 3, 4, 5]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [3] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [4] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [5] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Membrane; Reference proteome; Transmembrane. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 124 AA 
Protein Sequence
MPVRGPDVEA YCLRCECKYE ERSSVTIKVT IIIYLSILGL LLLYMVYLTL VEPILKRRLF 60
GHAQLIQSDD DIGDHQPFAN AHDVLARSRS RANVLNKVEY AQQRWKLQVQ EQRKSVFDRH 120
VVLS 124 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. 
Interpro
 IPR008853; TMEM9. 
Pfam
 PF05434; Tmemb_9 
SMART
  
PROSITE
  
PRINTS