CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-021955
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Partitioning defective 6 homolog alpha 
Protein Synonyms/Alias
 PAR-6; PAR-6 alpha; PAR-6A; PAR6C; Tax interaction protein 40; TIP-40 
Gene Name
 PARD6A 
Gene Synonyms/Alias
 PAR6A 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
19PDSIVEVKSKFDAEFubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Adapter protein involved in asymmetrical cell division and cell polarization processes. Probably involved in the formation of epithelial tight junctions. Association with PARD3 may prevent the interaction of PARD3 with F11R/JAM1, thereby preventing tight junction assembly. The PARD6-PARD3 complex links GTP-bound Rho small GTPases to atypical protein kinase C proteins. 
Sequence Annotation
 DOMAIN 15 95 OPR.
 DOMAIN 133 150 Pseudo-CRIB.
 DOMAIN 157 250 PDZ.
 REGION 1 116 Interaction with PRKCI and PRKCZ.
 REGION 126 253 Interaction with PARD3 and CDC42 (By
 MOD_RES 278 278 Phosphoserine.  
Keyword
 3D-structure; Alternative splicing; Cell cycle; Cell division; Cell junction; Cell membrane; Cell projection; Complete proteome; Cytoplasm; Membrane; Phosphoprotein; Polymorphism; Reference proteome; Tight junction. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 346 AA 
Protein Sequence
MARPQRTPAR SPDSIVEVKS KFDAEFRRFA LPRASVSGFQ EFSRLLRAVH QIPGLDVLLG 60
YTDAHGDLLP LTNDDSLHRA LASGPPPLRL LVQKRAEADS SGLAFASNSL QRRKKGLLLR 120
PVAPLRTRPP LLISLPQDFR QVSSVIDVDL LPETHRRVRL HKHGSDRPLG FYIRDGMSVR 180
VAPQGLERVP GIFISRLVRG GLAESTGLLA VSDEILEVNG IEVAGKTLDQ VTDMMVANSH 240
NLIVTVKPAN QRNNVVRGAS GRLTGPPSAG PGPAEPDSDD DSSDLVIENR QPPSSNGLSQ 300
GPPCWDLHPG CRHPGTRSSL PSLDDQEQAS SGWGSRIRGD GSGFSL 346 
Gene Ontology
 GO:0045177; C:apical part of cell; IEA:Compara.
 GO:0005938; C:cell cortex; IEA:Compara.
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0005634; C:nucleus; ISS:UniProtKB.
 GO:0005886; C:plasma membrane; TAS:Reactome.
 GO:0043234; C:protein complex; IEA:Compara.
 GO:0001726; C:ruffle; IEA:UniProtKB-SubCell.
 GO:0005923; C:tight junction; ISS:UniProtKB.
 GO:0030742; F:GTP-dependent protein binding; ISS:UniProtKB.
 GO:0017048; F:Rho GTPase binding; ISS:UniProtKB.
 GO:0008134; F:transcription factor binding; TAS:ProtInc.
 GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
 GO:0051301; P:cell division; IEA:UniProtKB-KW.
 GO:0045217; P:cell-cell junction maintenance; ISS:UniProtKB.
 GO:0070830; P:tight junction assembly; TAS:Reactome.
 GO:0007179; P:transforming growth factor beta receptor signaling pathway; TAS:Reactome.
 GO:0016032; P:viral reproduction; TAS:ProtInc. 
Interpro
 IPR000270; OPR_PB1.
 IPR001478; PDZ. 
Pfam
 PF00564; PB1
 PF00595; PDZ 
SMART
 SM00666; PB1
 SM00228; PDZ 
PROSITE
 PS50106; PDZ 
PRINTS