CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022947
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Alpha-methylacyl-CoA racemase 
Protein Synonyms/Alias
 2-methylacyl-CoA racemase 
Gene Name
 AMACR 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
58RSLVLDLKQPRGAAVubiquitination[1]
87FRRGVMEKLQLGPEIubiquitination[1]
135ALSGVLSKIGRSGENubiquitination[1, 2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
 Racemization of 2-methyl-branched fatty acid CoA esters. Responsible for the conversion of pristanoyl-CoA and C27-bile acyl-CoAs to their (S)-stereoisomers. 
Sequence Annotation
 MOTIF 380 382 Microbody targeting signal.
 ACT_SITE 152 152 Nucleophile (By similarity).  
Keyword
 Alternative splicing; Complete proteome; Disease mutation; Intrahepatic cholestasis; Isomerase; Mitochondrion; Peroxisome; Polymorphism; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 382 AA 
Protein Sequence
MALQGISVVE LSGLAPGPFC AMVLADFGAR VVRVDRPGSR YDVSRLGRGK RSLVLDLKQP 60
RGAAVLRRLC KRSDVLLEPF RRGVMEKLQL GPEILQRENP RLIYARLSGF GQSGSFCRLA 120
GHDINYLALS GVLSKIGRSG ENPYAPLNLL ADFAGGGLMC ALGIIMALFD RTRTGKGQVI 180
DANMVEGTAY LSSFLWKTQK LSLWEAPRGQ NMLDGGAPFY TTYRTADGEF MAVGAIEPQF 240
YELLIKGLGL KSDELPNQMS MDDWPEMKKK FADVFAEKTK AEWCQIFDGT DACVTPVLTF 300
EEVVHHDHNK ERGSFITSEE QDVSPRPAPL LLNTPAIPSF KRDPFIGEHT EEILEEFGFS 360
REEIYQLNSD KIIESNKVKA SL 382 
Gene Ontology
 GO:0005739; C:mitochondrion; IDA:UniProtKB.
 GO:0005782; C:peroxisomal matrix; TAS:Reactome.
 GO:0005777; C:peroxisome; IDA:UniProtKB.
 GO:0008111; F:alpha-methylacyl-CoA racemase activity; IDA:UniProtKB.
 GO:0006699; P:bile acid biosynthetic process; TAS:Reactome.
 GO:0033540; P:fatty acid beta-oxidation using acyl-CoA oxidase; TAS:Reactome. 
Interpro
 IPR003673; CoA-Trfase_fam_III.
 IPR023606; CoA-Trfase_III_dom. 
Pfam
 PF02515; CoA_transf_3 
SMART
  
PROSITE
  
PRINTS