CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004288
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Helicase IV 
Protein Synonyms/Alias
 75 kDa helicase 
Gene Name
 helD 
Gene Synonyms/Alias
 b0962; JW0945 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
158NCREAWRKCQAWLKDacetylation[1]
164RKCQAWLKDIESARLacetylation[1]
295KKVPIVSKLENDTAAacetylation[1]
579MRPASLEKAATRWPKacetylation[1]
586KAATRWPKLQIDFMTacetylation[1]
663RVWALFNKENPSPFVacetylation[1]
674SPFVEILKNLDVPVAacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Helicase IV catalyzes the unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand in a reaction that is dependent upon the hydrolysis of ATP. 
Sequence Annotation
 DOMAIN 195 505 UvrD-like helicase ATP-binding.
 NP_BIND 216 223 ATP (Probable).
 BINDING 503 503 ATP (By similarity).  
Keyword
 ATP-binding; Complete proteome; Direct protein sequencing; DNA-binding; Helicase; Hydrolase; Nucleotide-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 684 AA 
Protein Sequence
MELKATTLGK RLAQHPYDRA VILNAGIKVS GDRHEYLIPF NQLLAIHCKR GLVWGELEFV 60
LPDEKVVRLH GTEWGETQRF YHHLDAHWRR WSGEMSEIAS GVLRQQLDLI ATRTGENKWL 120
TREQTSGVQQ QIRQALSALP LPVNRLEEFD NCREAWRKCQ AWLKDIESAR LQHNQAYTEA 180
MLTEYADFFR QVESSPLNPA QARAVVNGEH SLLVLAGAGS GKTSVLVARA GWLLARGEAS 240
PEQILLLAFG RKAAEEMDER IRERLHTEDI TARTFHALAL HIIQQGSKKV PIVSKLENDT 300
AARHELFIAE WRKQCSEKKA QAKGWRQWLT EEMQWSVPEG NFWDDEKLQR RLASRLDRWV 360
SLMRMHGGAQ AEMIASAPEE IRDLFSKRIK LMAPLLKAWK GALKAENAVD FSGLIHQAIV 420
ILEKGRFISP WKHILVDEFQ DISPQRAALL AALRKQNSQT TLFAVGDDWQ AIYRFSGAQM 480
SLTTAFHENF GEGERCDLDT TYRFNSRIGE VANRFIQQNP GQLKKPLNSL TNGDKKAVTL 540
LDESQLDALL DKLSGYAKPE ERILILARYH HMRPASLEKA ATRWPKLQID FMTIHASKGQ 600
QADYVIIVGL QEGSDGFPAA ARESIMEEAL LPPVEDFPDA EERRLMYVAL TRARHRVWAL 660
FNKENPSPFV EILKNLDVPV ARKP 684 
Gene Ontology
 GO:0033202; C:DNA helicase complex; IDA:EcoCyc.
 GO:0016020; C:membrane; IEA:InterPro.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0043140; F:ATP-dependent 3'-5' DNA helicase activity; IDA:EcoCyc.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0000155; F:phosphorelay sensor kinase activity; IEA:InterPro.
 GO:0006310; P:DNA recombination; IMP:EcoCyc.
 GO:0000160; P:phosphorelay signal transduction system; IEA:GOC.
 GO:0023014; P:signal transduction by phosphorylation; IEA:GOC. 
Interpro
 IPR014017; DNA_helicase_UvrD-like_C.
 IPR000212; DNA_helicase_UvrD/REP.
 IPR022161; Helicase_IV_N.
 IPR027417; P-loop_NTPase.
 IPR003661; Sig_transdc_His_kin_sub1_dim/P.
 IPR014016; UvrD-like_ATP-bd. 
Pfam
 PF12462; Nucleolin_N
 PF00580; UvrD-helicase
 PF13361; UvrD_C 
SMART
 SM00388; HisKA 
PROSITE
 PS51198; UVRD_HELICASE_ATP_BIND 
PRINTS