CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011405
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 [PSI+] inducibility protein 3 
Protein Synonyms/Alias
 LAS seventeen-binding protein 2; LAS17-binding protein 2 
Gene Name
 PIN3 
Gene Synonyms/Alias
 LSB2; YPR154W 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
36DVYDQINKSLPAKWDubiquitination[1]
41INKSLPAKWDPANAPubiquitination[1]
76QDGDLGLKPGDKVQLubiquitination[1]
80LGLKPGDKVQLLEKLubiquitination[1, 2, 3, 4, 5]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] A proteomics approach to understanding protein ubiquitination.
 Peng J, Schwartz D, Elias JE, Thoreen CC, Cheng D, Marsischky G, Roelofs J, Finley D, Gygi SP.
 Nat Biotechnol. 2003 Aug;21(8):921-6. [PMID: 12872131]
 [3] Computational identification of ubiquitylation sites from protein sequences.
 Tung CW, Ho SY.
 BMC Bioinformatics. 2008 Jul 15;9:310. [PMID: 18625080]
 [4] Identification, analysis, and prediction of protein ubiquitination sites.
 Radivojac P, Vacic V, Haynes C, Cocklin RR, Mohan A, Heyen JW, Goebl MG, Iakoucheva LM.
 Proteins. 2010 Feb 1;78(2):365-80. [PMID: 19722269]
 [5] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047
Functional Description
 Overproduction promotes the de novo induction of the [PSI+] prion form of SUP35. The prion-inducing effect depends on the association with the actin cytoskeleton. Also implicated in prion maintenance during heat stress. 
Sequence Annotation
 DOMAIN 54 113 SH3.
 MOTIF 124 127 PY motif.
 MOD_RES 52 52 Phosphoserine.
 MOD_RES 55 55 Phosphoserine.
 CROSSLNK 80 80 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 3D-structure; Complete proteome; Cytoplasm; Cytoskeleton; Isopeptide bond; Nucleus; Phosphoprotein; Reference proteome; SH3 domain; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 215 AA 
Protein Sequence
MSASLINRSL TNIRTELDFL KGSNVISNDV YDQINKSLPA KWDPANAPRN ASPASLEYVE 60
ALYQFDPQQD GDLGLKPGDK VQLLEKLSPE WYKGSCNGRT GIFPANYVKP AFSGSNGPSN 120
LPPPPQYKAQ ELQQIPTQNS AASSYQQQPF PPPSTNYYQQ PQQQPQQAPP PQQQQQQQQH 180
QSSHSHLKSF GSKLGNAAIF GAGASIGSDI VNNIF 215 
Gene Ontology
 GO:0030479; C:actin cortical patch; IDA:SGD.
 GO:0005634; C:nucleus; IDA:SGD.
 GO:0034316; P:negative regulation of Arp2/3 complex-mediated actin nucleation; IDA:SGD. 
Interpro
 IPR000108; p67phox.
 IPR001452; SH3_domain. 
Pfam
 PF00018; SH3_1 
SMART
 SM00326; SH3 
PROSITE
 PS50002; SH3 
PRINTS
 PR00499; P67PHOX.
 PR00452; SH3DOMAIN.