CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-025556
UniProt Accession
Q43303_SOYBN
;
Q43303
;
Q42790
;
Q42816
;
Q42819
;
Q42820
Genbank Protein ID
U38425
;
U38426
;
U38427
Genbank Nucleotide ID
AAB03538.1
;
AAB03539.1
;
AAB03540.1
Protein Name
Histone H3
Protein Synonyms/Alias
Gene Name
Gene Synonyms/Alias
Created Date
July 27, 2013
Organism
Glycine max (Soybean) (Glycine hispida)
NCBI Taxa ID
3847
Lysine Modification
Position
Peptide
Type
References
15
ARKSTGG
K
APRKQLA
acetylation
[1]
19
TGGKAPR
K
QLATKAA
acetylation
[1]
24
PRKQLAT
K
AARKSAP
acetylation
[1]
Reference
[1] Mass spectrometry analysis of the variants of histone H3 and H4 of soybean and their post-translational modifications.
Wu T, Yuan T, Tsai SN, Wang C, Sun SM, Lam HM, Ngai SM.
BMC Plant Biol. 2009 Jul 31;9:98. [
PMID: 19643030
]
Functional Description
Sequence Annotation
Keyword
Chromosome; DNA-binding; Nucleosome core; Nucleus.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
127 AA
Protein Sequence
MARTKQTARK STGGKAPRKQ LATKAARKSA PTTGGVKKPH RYRPGTVALR EIRKYQKSTE 60
LLIRKLPFQR LVREIAQDFK TDLRFQSHAV LALQEAAEAY LVGLFEDTNL CAIHAKRVTM 120
MPKDIQL 127
Gene Ontology
GO:0000786
; C:nucleosome; IEA:UniProtKB-KW.
GO:0005634
; C:nucleus; IEA:UniProtKB-KW.
GO:0003677
; F:DNA binding; IEA:UniProtKB-KW.
GO:0006334
; P:nucleosome assembly; IEA:InterPro.
Interpro
IPR009072
; Histone-fold.
IPR007125
; Histone_core_D.
IPR000164
; Histone_H3.
Pfam
PF00125
; Histone
SMART
SM00428
; H3
PROSITE
PS00322
; HISTONE_H3_1
PS00959
; HISTONE_H3_2
PRINTS
PR00622
; HISTONEH3.