CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-017543
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Coiled-coil domain-containing protein 71L 
Protein Synonyms/Alias
  
Gene Name
 CCDC71L 
Gene Synonyms/Alias
 C7orf74 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
39GLEAREEKVVYSRSQubiquitination[1]
54LSLADSTKALGDAFKubiquitination[1, 2, 3, 4, 5, 6]
61KALGDAFKLFMPRSTubiquitination[1, 2, 3, 4, 5, 6]
96SPHILRSKDVYGYSSubiquitination[1, 4, 6]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [4] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [5] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [6] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Alternative splicing; Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 235 AA 
Protein Sequence
MRRSMKRRRR RRPVAPATAA RGGDFRAEDG AGLEAREEKV VYSRSQLSLA DSTKALGDAF 60
KLFMPRSTEF MSSDAELWSF LCSLKHQFSP HILRSKDVYG YSSCRALVPD PPGPPTARGQ 120
ARRPVPRAAA RRRRRGARAA AARRRKPRPP PPPPPPPEES CPAKPVAPGP CFGGRTLEEI 180
WRAATPTLTT FPTIRVGSDV WGERSLAAAR RRARQVLRVN LEPMVRLRRF PVPRA 235 
Gene Ontology
  
Interpro
 IPR026695; Ccdc71/71L. 
Pfam
  
SMART
  
PROSITE
  
PRINTS