CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-037276
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 PDZ and LIM domain protein 5 
Protein Synonyms/Alias
  
Gene Name
 PDLIM5 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
202SEADNTKKANNSQEPubiquitination[1]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; LIM domain; Metal-binding; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 483 AA 
Protein Sequence
MSNYSVSLVG PAPWGFRLQG GKDFNMPLTI SSLKDGGKAA QANVRIGDVV LSIDGINAQG 60
MTHLEAQNKI KGCTGSLNMT LQRASAAPKP EPVPVQKPTV TSVCSETSQE LAEGQRRGSQ 120
GDSKQQNGKI PPKRPPRKHI VERYTEFYHV PTHSDASKKR LIEDTEDWRP RTGTTQSRSF 180
RILAQITGTE HLKESEADNT KKANNSQEPS PQLASSVAST RSMPESLDSP TSGRPGVTSL 240
TAAAAFKPVG STGVIKSPSW QRPNQGVPST GRISNSATYS GSVAPANSAL GQTQPSDQDT 300
LVQRAEHIPA GKRTPMCAHC NQVIRGPFLV ALGKSWHPEE FNCAHCKNTM AYIGFVEEKG 360
ALYCELCYEK FFAPECGRCQ RKILGEVISA LKQTWHVSCF VCVACGKPIR NNVFHLEDGE 420
PYCETDYYAL FGTICHGCEF PIEAGDMFLE ALGYTWHDTC FVCSVCCESL EGQTFFSKKD 480
KPL 483 
Gene Ontology
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR001478; PDZ.
 IPR001781; Znf_LIM. 
Pfam
 PF00412; LIM
 PF00595; PDZ 
SMART
 SM00132; LIM
 SM00228; PDZ 
PROSITE
 PS00478; LIM_DOMAIN_1
 PS50023; LIM_DOMAIN_2
 PS50106; PDZ 
PRINTS