CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-014384
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Programmed cell death protein 4 
Protein Synonyms/Alias
 Protein MA-3; Topoisomerase-inhibitor suppressed protein 
Gene Name
 Pdcd4 
Gene Synonyms/Alias
 Ma3; Tis 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
242DVEKSFDKLLKDLPEubiquitination[1]
245KSFDKLLKDLPELALubiquitination[1]
297QARAALDKATVLLSMubiquitination[1]
306TVLLSMSKGGKRKDSubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Inhibits translation initiation and cap-dependent translation. May excert its function by hindering the interaction between EIF4A1 and EIF4G. Inhibits the helicase activity of EIF4A. Modulates the activation of JUN kinase. Down-regulates the expression of MAP4K1, thus inhibiting events important in driving invasion, namely, MAPK85 activation and consequent JUN-dependent transcription. May play a role in apoptosis. Tumor suppressor. Inhibits tumor promoter-induced neoplastic transformation. Binds RNA. 
Sequence Annotation
 DOMAIN 163 284 MI 1.
 DOMAIN 326 449 MI 2.
 MOTIF 58 64 Nuclear localization signal (Potential).
 MOTIF 70 76 Phosphodegron (By similarity).
 MOTIF 448 454 Nuclear localization signal (Potential).
 MOD_RES 1 1 N-acetylmethionine (By similarity).
 MOD_RES 67 67 Phosphoserine; by PKB and RPS6KB1 (By
 MOD_RES 76 76 Phosphoserine.
 MOD_RES 78 78 Phosphoserine (By similarity).
 MOD_RES 94 94 Phosphoserine (By similarity).
 MOD_RES 152 152 Phosphotyrosine (By similarity).
 MOD_RES 457 457 Phosphoserine; by PKB (By similarity).  
Keyword
 3D-structure; Acetylation; Apoptosis; Complete proteome; Cytoplasm; Nucleus; Phosphoprotein; Reference proteome; Repeat; RNA-binding; Tumor suppressor; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 469 AA 
Protein Sequence
MDIENEQTLN VNPTDPDNLS DSLFSGDEEN AGTEEIKNEI NGNWISASTI NEARINAKAK 60
RRLRKNSSRD SGRGDSVSDN GSEAVRSGVA VPTSPKGRLL DRRSRSGKGR GLPKKGGAGG 120
KGVWGTPGQV YDVEEVDVKD PNYDDDQENC VYETVVLPLD ETAFEKTLTP IIQEYFEHGD 180
TNEVAEMLRD LNLGEMKSGV PVLAVSLALE GKASHREMTS KLLSDLCGTV MSTNDVEKSF 240
DKLLKDLPEL ALDTPRAPQL VGQFIARAVG DGILCNTYID SYKGTVDCVQ ARAALDKATV 300
LLSMSKGGKR KDSVWGSGGG QQPVNHLVKE IDMLLKEYLL SGDISEAEHC LKELEVPHFH 360
HELVYEAIVM VLESTGESAF KMILDLLKSL WKSSTITIDQ MKRGYERIYN EIPDINLDVP 420
HSYSVLERFV EECFQAGIIS KQLRDLCPSR GRKRFVSEGD GGRLKPESY 469 
Gene Ontology
 GO:0005829; C:cytosol; ISS:UniProtKB.
 GO:0005634; C:nucleus; ISS:UniProtKB.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
 GO:0007569; P:cell aging; ISS:UniProtKB.
 GO:0043508; P:negative regulation of JUN kinase activity; ISS:UniProtKB.
 GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.
 GO:0016070; P:RNA metabolic process; IEA:InterPro. 
Interpro
 IPR016024; ARM-type_fold.
 IPR003891; Initiation_fac_eIF4g_MI.
 IPR016021; MIF4-like_typ_1/2/3. 
Pfam
 PF02847; MA3 
SMART
 SM00544; MA3 
PROSITE
 PS51366; MI 
PRINTS