CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012245
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Vascular endothelial zinc finger 1 
Protein Synonyms/Alias
 Putative transcription factor DB1; Zinc finger protein 161 
Gene Name
 VEZF1 
Gene Synonyms/Alias
 DB1; ZNF161 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
181HACEMCGKAFRDVYHubiquitination[1]
273CTAAFATKDRLRTHMubiquitination[1]
325TCKQGISKTCMSEETubiquitination[1]
362HVTSWPGKQVETLRLubiquitination[2, 3]
375RLWEEAVKARKKEAAubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Possible transcription factor. Specifically binds to the CT/GC-rich region of the interleukin-3 promoter and mediates tax transactivation of IL-3. 
Sequence Annotation
 REPEAT 394 400 1.
 REPEAT 445 451 2.
 REPEAT 457 463 3.
 REPEAT 479 485 4.
 ZN_FING 74 96 C2H2-type 1.
 ZN_FING 174 196 C2H2-type 2.
 ZN_FING 202 224 C2H2-type 3.
 ZN_FING 232 255 C2H2-type 4.
 ZN_FING 261 283 C2H2-type 5.
 ZN_FING 287 308 C2H2-type 6.
 REGION 394 485 4 X 7 AA repeats of P-[LV]-T-[IL]-T-[ST]-
 MOD_RES 362 362 N6-acetyllysine.  
Keyword
 Acetylation; Activator; Complete proteome; DNA-binding; Metal-binding; Nucleus; Reference proteome; Repeat; Transcription; Transcription regulation; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 521 AA 
Protein Sequence
MEANWTAFLF QAHEASHHQQ QAAQNSLLPL LSSAVEPPDQ KPLLPIPITQ KPQGAPETLK 60
DAIGIKKEKP KTSFVCTYCS KAFRDSYHLR RHESCHTGIK LVSRPKKTPT TVVPLISTIA 120
GDSSRTSLVS TIAGILSTVT TSSSGTNPSS SASTTAMPVT QSVKKPSKPV KKNHACEMCG 180
KAFRDVYHLN RHKLSHSDEK PFECPICNQR FKRKDRMTYH VRSHEGGITK PYTCSVCGKG 240
FSRPDHLSCH VKHVHSTERP FKCQTCTAAF ATKDRLRTHM VRHEGKVSCN ICGKLLSAAY 300
ITSHLKTHGQ SQSINCNTCK QGISKTCMSE ETSNQKQQQQ QQQQQQQQQQ QQQQHVTSWP 360
GKQVETLRLW EEAVKARKKE AANLCQTSTA ATTPVTLTTP FSITSSVSSG TMSNPVTVAA 420
AMSMRSPVNV SSAVNITSPM NIGHPVTITS PLSMTSPLTL TTPVNLPTPV TAPVNIAHPV 480
TITSPMNLPT PMTLAAPLNI AMRPVESMPF LPQALPTSPP W 521 
Gene Ontology
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0001525; P:angiogenesis; IEA:Compara.
 GO:0006968; P:cellular defense response; TAS:ProtInc.
 GO:0001885; P:endothelial cell development; IEA:Compara.
 GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.
 GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc. 
Interpro
 IPR007087; Znf_C2H2.
 IPR015880; Znf_C2H2-like.
 IPR013087; Znf_C2H2/integrase_DNA-bd. 
Pfam
 PF00096; zf-C2H2 
SMART
 SM00355; ZnF_C2H2 
PROSITE
 PS00028; ZINC_FINGER_C2H2_1
 PS50157; ZINC_FINGER_C2H2_2 
PRINTS