CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-024143
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Methyl-CpG-binding domain protein 2 
Protein Synonyms/Alias
 Methyl-CpG-binding protein MBD2 
Gene Name
 Mbd2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
188YYFSPSGKKFRSKPQacetylation[1]
188YYFSPSGKKFRSKPQsuccinylation[1]
Reference
 [1] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337
Functional Description
 Binds CpG islands in promoters where the DNA is methylated at position 5 of cytosine within CpG dinucleotides. Binds hemimethylated DNA as well. Recruits histone deacetylases and DNA methyltransferases. Acts as transcriptional repressor and plays a role in gene silencing. Functions as a scaffold protein, targeting GATAD2A and GATAD2B to chromatin to promote repression (By similarity). May enhance the activation of some unmethylated cAMP-responsive promoters (By similarity). Selectively represses transcription activity of methylated rRNA promoters. 
Sequence Annotation
 DOMAIN 148 216 MBD.
 MOD_RES 184 184 Phosphoserine (By similarity).
 MOD_RES 410 410 Phosphoserine (By similarity).  
Keyword
 Alternative splicing; Complete proteome; DNA-binding; Nucleus; Phosphoprotein; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 414 AA 
Protein Sequence
MRAHPGGGRC CPEQEEGESA AGGSGAGGDS AIEQGGQGSA LAPSPVSGVR REGARGGGRG 60
RGRWKQAARG GGVCGRGRGR GRGRGRGRGR GRGRGRPQSG GSGLGGDGGG GAGGCGGGSG 120
GGVAPRRDPV PFPSGSSGPG PRGPRATESG KRMDCPALPP GWKKEEVIRK SGLSAGKSDV 180
YYFSPSGKKF RSKPQLARYL GNAVDLSSFD FRTGKMMPSK LQKNKQRLRN DPLNQNKGKP 240
DLNTTLPIRQ TASIFKQPVT KFTNHPSNKV KSDPQRMNEQ PRQLFWEKRL QGLSASDVTE 300
QIIKTMELPK GLQGVGPGSN DETLLSAVAS ALHTSSAPIT GQVSAAVEKN PAVWLNTSQP 360
LCKAFIVTDE DIRKQEERVQ QVRKKLEEAL MADILSRAAD TEEVDIDMDS GDEA 414 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:MGI.
 GO:0000792; C:heterochromatin; IDA:MGI.
 GO:0000118; C:histone deacetylase complex; IDA:MGI.
 GO:0003682; F:chromatin binding; IDA:MGI.
 GO:0008327; F:methyl-CpG binding; IDA:MGI.
 GO:0003729; F:mRNA binding; IDA:MGI.
 GO:0035197; F:siRNA binding; IDA:MGI.
 GO:0043623; P:cellular protein complex assembly; IMP:MGI.
 GO:0042711; P:maternal behavior; IMP:MGI.
 GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:MGI.
 GO:0030177; P:positive regulation of Wnt receptor signaling pathway; IGI:MGI.
 GO:0042127; P:regulation of cell proliferation; IGI:MGI.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR016177; DNA-bd_integrase-typ.
 IPR025884; MeCpG-bd_2/3_C_dom.
 IPR001739; Methyl_CpG_DNA-bd. 
Pfam
 PF01429; MBD
 PF14048; MBD_C 
SMART
 SM00391; MBD 
PROSITE
 PS50982; MBD 
PRINTS