CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008001
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Glycine receptor subunit beta 
Protein Synonyms/Alias
 Glycine receptor 58 kDa subunit 
Gene Name
 Glrb 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
117KWNDPRLKLPSDFRGubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 The glycine receptor is a neurotransmitter-gated ion channel. Binding of glycine to its receptor increases the chloride conductance and thus produces hyperpolarization (inhibition of neuronal firing). 
Sequence Annotation
 CARBOHYD 54 54 N-linked (GlcNAc...) (Potential).
 CARBOHYD 242 242 N-linked (GlcNAc...) (Potential).
 DISULFID 183 197 By similarity.  
Keyword
 Cell junction; Cell membrane; Chloride; Chloride channel; Complete proteome; Disease mutation; Disulfide bond; Glycoprotein; Ion channel; Ion transport; Ligand-gated ion channel; Membrane; Postsynaptic cell membrane; Receptor; Reference proteome; Signal; Synapse; Transmembrane; Transmembrane helix; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 496 AA 
Protein Sequence
MKFSLAISFF ILMSLLFEDA CAKEKSSKKG KGKKKQYLCP SQQSPEDLAR VPPNSTSNIL 60
NRLLVSYDPR IRPNFKGIPV DVVVNIFINS FGSIQETTMD YRVNIFLRQK WNDPRLKLPS 120
DFRGSDALTV DPTMYKCLWK PDLFFANEKS ANFHDVTQEN ILLFIFRDGD VLVSMRLSIT 180
LSCPLDLTLF PMDTQRCKMQ LESFGYTTDD LRFIWQSGDP VQLEKIALPQ FDIKKEDIEY 240
GNCTKYYKGT GYYTCVEVIF TLRRQVGFYM MGVYAPTLLI VVLSWLSFWI NPDASAARVP 300
LGIFSVLSLA SECTTLAAEL PKVSYVKALD VWLIACLLFG FASLVEYAVV QVMLNNPKRV 360
EAEKARIAKA EQADGKGGNA AKKNTVNGTG TPVHISTLQV GETRCKKVCT SKSDLRSNDF 420
SIVGSLPRDF ELSNYDCYGK PIEVNNGLGK PQAKNKKPPP AKPVIPTAAK RIDLYARALF 480
PFCFLFFNVI YWSIYL 496 
Gene Ontology
 GO:0030054; C:cell junction; IEA:UniProtKB-KW.
 GO:0034707; C:chloride channel complex; IEA:UniProtKB-KW.
 GO:0005783; C:endoplasmic reticulum; ISA:MGI.
 GO:0009897; C:external side of plasma membrane; ISA:MGI.
 GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-SubCell.
 GO:0016934; F:extracellular-glycine-gated chloride channel activity; IMP:MGI.
 GO:0016594; F:glycine binding; IMP:MGI.
 GO:0007340; P:acrosome reaction; IMP:MGI.
 GO:0007628; P:adult walking behavior; IMP:MGI.
 GO:0007399; P:nervous system development; ISS:UniProtKB.
 GO:0007218; P:neuropeptide signaling pathway; ISS:UniProtKB.
 GO:0051291; P:protein heterooligomerization; IEA:Compara.
 GO:0042391; P:regulation of membrane potential; IMP:MGI.
 GO:0060013; P:righting reflex; IMP:MGI.
 GO:0001964; P:startle response; ISS:UniProtKB.
 GO:0060012; P:synaptic transmission, glycinergic; IMP:MGI.
 GO:0007601; P:visual perception; IMP:MGI. 
Interpro
 IPR008060; Glycine_rcpt_B.
 IPR006202; Neur_chan_lig-bd.
 IPR006201; Neur_channel.
 IPR006029; Neurotrans-gated_channel_TM.
 IPR018000; Neurotransmitter_ion_chnl_CS. 
Pfam
 PF02931; Neur_chan_LBD
 PF02932; Neur_chan_memb 
SMART
  
PROSITE
 PS00236; NEUROTR_ION_CHANNEL 
PRINTS
 PR01677; GLYRBETA.
 PR00252; NRIONCHANNEL.