CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008048
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Nuclear receptor-interacting protein 1 
Protein Synonyms/Alias
 Nuclear factor RIP140; Receptor-interacting protein 140 
Gene Name
 NRIP1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
97SEDWNAAKRKRLSDSubiquitination[1]
111SIMNLNVKKEALLAGacetylation[2]
158QQIRQSLKEQGYALSacetylation[2]
170ALSHDSLKVEKDLRCsumoylation[3]
286YSREHALKTQNANQAacetylation[2]
286YSREHALKTQNANQAubiquitination[1]
310RLQENGQKDVGSYQLacetylation[2]
446VPIDLSCKHRTEKSEacetylation[2, 4]
481KVPDVDIKEDQDTSKacetylation[2]
590VCSTQSEKLTNTASNmethylation[5]
652VEEQRPSKQLLTGNTmethylation[5]
677NSPLLSNKTNAVEENubiquitination[1]
756QILMVKIKSEPCDDLmethylation[5]
756QILMVKIKSEPCDDLsumoylation[3]
963SVADSKKKGHKNNVTacetylation[6]
966DSKKKGHKNNVTNSKacetylation[6]
1105SVSQVTAKEELLPTAubiquitination[1]
1115LLPTAETKASFFNLRubiquitination[7, 8]
1154LGSVLTIKKESE***sumoylation[3]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Proteome-wide prediction of acetylation substrates.
 Basu A, Rose KL, Zhang J, Beavis RC, Ueberheide B, Garcia BA, Chait B, Zhao Y, Hunt DF, Segal E, Allis CD, Hake SB.
 Proc Natl Acad Sci U S A. 2009 Aug 18;106(33):13785-90. [PMID: 19666589]
 [3] SUMOylation modulates the transcription repressor function of RIP140.
 Rytinki MM, Palvimo JJ.
 J Biol Chem. 2008 Apr 25;283(17):11586-95. [PMID: 18211901]
 [4] Acetylation of nuclear hormone receptor-interacting protein RIP140 regulates binding of the transcriptional corepressor CtBP.
 Vo N, Fjeld C, Goodman RH.
 Mol Cell Biol. 2001 Sep;21(18):6181-8. [PMID: 11509661]
 [5] Lysine methylation of nuclear co-repressor receptor interacting protein 140.
 Huq MD, Ha SG, Barcelona H, Wei LN.
 J Proteome Res. 2009 Mar;8(3):1156-67. [PMID: 19216533]
 [6] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786]
 [7] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [8] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Modulates transcriptional activation by steroid receptors such as NR3C1, NR3C2 and ESR1. Also modulates transcriptional repression by nuclear hormone receptors. 
Sequence Annotation
 REGION 1 415 Interaction with ZNF366.
 REGION 78 333 Repression domain 1.
 REGION 410 700 Repression domain 2.
 REGION 431 472 Required for targeting to small nuclear
 REGION 735 885 Repression domain 3.
 REGION 753 1158 Interaction with ZNF366.
 REGION 1118 1158 Repression domain 4.
 MOTIF 21 25 LXXLL motif 1.
 MOTIF 133 137 LXXLL motif 2.
 MOTIF 185 189 LXXLL motif 3.
 MOTIF 266 270 LXXLL motif 4.
 MOTIF 380 384 LXXLL motif 5.
 MOTIF 440 446 CTBP-binding; principal site.
 MOTIF 500 504 LXXLL motif 6.
 MOTIF 565 569 CTBP-binding.
 MOTIF 599 603 CTBP-binding (Potential).
 MOTIF 713 717 LXXLL motif 7.
 MOTIF 819 823 LXXLL motif 8.
 MOTIF 936 940 LXXLL motif 9.
 MOTIF 946 950 CTBP-binding.
 MOTIF 1061 1074 Ligand-dependent nuclear receptor binding
 MOD_RES 104 104 Phosphoserine (By similarity).
 MOD_RES 111 111 N6-acetyllysine (By similarity).
 MOD_RES 158 158 N6-acetyllysine (By similarity).
 MOD_RES 207 207 Phosphothreonine (By similarity).
 MOD_RES 286 286 N6-acetyllysine (By similarity).
 MOD_RES 310 310 N6-acetyllysine (By similarity).
 MOD_RES 356 356 Phosphoserine (By similarity).
 MOD_RES 378 378 Phosphoserine (By similarity).
 MOD_RES 446 446 N6-acetyllysine.
 MOD_RES 481 481 N6-acetyllysine (By similarity).
 MOD_RES 487 487 Phosphoserine (By similarity).
 MOD_RES 518 518 Phosphoserine (By similarity).
 MOD_RES 528 528 N6-acetyllysine (By similarity).
 MOD_RES 542 542 Phosphoserine (By similarity).
 MOD_RES 606 606 N6-acetyllysine (By similarity).
 MOD_RES 671 671 Phosphoserine (By similarity).
 MOD_RES 931 931 N6-acetyllysine (By similarity).
 MOD_RES 1001 1001 Phosphoserine (By similarity).  
Keyword
 3D-structure; Acetylation; Complete proteome; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Repeat; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1158 AA 
Protein Sequence
MTHGEELGSD VHQDSIVLTY LEGLLMHQAA GGSGTAVDKK SAGHNEEDQN FNISGSAFPT 60
CQSNGPVLNT HTYQGSGMLH LKKARLLQSS EDWNAAKRKR LSDSIMNLNV KKEALLAGMV 120
DSVPKGKQDS TLLASLLQSF SSRLQTVALS QQIRQSLKEQ GYALSHDSLK VEKDLRCYGV 180
ASSHLKTLLK KSKVKDQKPD TNLPDVTKNL IRDRFAESPH HVGQSGTKVM SEPLSCAARL 240
QAVASMVEKR ASPATSPKPS VACSQLALLL SSEAHLQQYS REHALKTQNA NQAASERLAA 300
MARLQENGQK DVGSYQLPKG MSSHLNGQAR TSSSKLMASK SSATVFQNPM GIIPSSPKNA 360
GYKNSLERNN IKQAANNSLL LHLLKSQTIP KPMNGHSHSE RGSIFEESST PTTIDEYSDN 420
NPSFTDDSSG DESSYSNCVP IDLSCKHRTE KSESDQPVSL DNFTQSLLNT WDPKVPDVDI 480
KEDQDTSKNS KLNSHQKVTL LQLLLGHKNE ENVEKNTSPQ GVHNDVSKFN TQNYARTSVI 540
ESPSTNRTTP VSTPPLLTSS KAGSPINLSQ HSLVIKWNSP PYVCSTQSEK LTNTASNHSM 600
DLTKSKDPPG EKPAQNEGAQ NSATFSASKL LQNLAQCGMQ SSMSVEEQRP SKQLLTGNTD 660
KPIGMIDRLN SPLLSNKTNA VEENKAFSSQ PTGPEPGLSG SEIENLLERR TVLQLLLGNP 720
NKGKSEKKEK TPLRDESTQE HSERALSEQI LMVKIKSEPC DDLQIPNTNV HLSHDAKSAP 780
FLGMAPAVQR SAPALPVSED FKSEPVSPQD FSFSKNGLLS RLLRQNQDSY LADDSDRSHR 840
NNEMALLESK NLCMVPKKRK LYTEPLENPF KKMKNNIVDA ANNHSAPEVL YGSLLNQEEL 900
KFSRNDLEFK YPAGHGSASE SEHRSWARES KSFNVLKQLL LSENCVRDLS PHRSNSVADS 960
KKKGHKNNVT NSKPEFSISS LNGLMYSSTQ PSSCMDNRTF SYPGVVKTPV SPTFPEHLGC 1020
AGSRPESGLL NGCSMPSEKG PIKWVITDAE KNEYEKDSPR LTKTNPILYY MLQKGGNSVT 1080
SRETQDKDIW REASSAESVS QVTAKEELLP TAETKASFFN LRSPYNSHMG NNASRPHSAN 1140
GEVYGLLGSV LTIKKESE 1158 
Gene Ontology
 GO:0000118; C:histone deacetylase complex; IEA:Compara.
 GO:0005634; C:nucleus; IDA:UniProtKB.
 GO:0050681; F:androgen receptor binding; NAS:UniProtKB.
 GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.
 GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
 GO:0030521; P:androgen receptor signaling pathway; NAS:UniProtKB.
 GO:0019915; P:lipid storage; IEA:Compara.
 GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.
 GO:0001543; P:ovarian follicle rupture; IEA:Compara.
 GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR026649; NRIP1. 
Pfam
  
SMART
  
PROSITE
  
PRINTS