CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-039534
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Transcription initiation factor IIF, beta subunit 
Protein Synonyms/Alias
  
Gene Name
 AT3G52270, At3g52270 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Arabidopsis thaliana (Mouse-ear cress) 
NCBI Taxa ID
 3702 
Lysine Modification
Position
Peptide
Type
References
260NQGTYELKPEYKKATubiquitination[1]
Reference
 [1] Multidimensional protein identification technology (MudPIT) analysis of ubiquitinated proteins in plants.
 Maor R, Jones A, Nühse TS, Studholme DJ, Peck SC, Shirasu K.
 Mol Cell Proteomics. 2007 Apr;6(4):601-10. [PMID: 17272265] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Initiation factor; Protein biosynthesis; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 269 AA 
Protein Sequence
MSLREMEDVK VEMKVRKNEN EALETGLAER SMLLMKAPSL VASSLQSHSF PDDPYRPDDP 60
YRPDAKVILG VDPLAHEDEG TQFVMELARA DSGNMPRRYT LDMSKDFIPM NVFCESSDGK 120
MSVEGKIKNK FDMRPHNENI ESYGRLCRER TNKYMGKNRQ IQVIDNARGM HMRPMPGMII 180
PTAAPEKKKL TNRTSEMKRT RRDRREMEEV MFNLFERQSN WTLRLLIQET DQPEQFLKDL 240
LKDLCIYNNK GSNQGTYELK PEYKKATQE 269 
Gene Ontology
 GO:0005674; C:transcription factor TFIIF complex; IEA:InterPro.
 GO:0005524; F:ATP binding; IEA:InterPro.
 GO:0003824; F:catalytic activity; IEA:InterPro.
 GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
 GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro. 
Interpro
 IPR003196; TFIIF_beta.
 IPR011039; TFIIF_interaction.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF02270; TFIIF_beta 
SMART
  
PROSITE
  
PRINTS