UniProt Accession

 Q9H1A6_HUMAN; Q9H1A6 

Genbank Protein ID

 AC093668; AJ277932; AJ277928; AJ277929; AJ277930 

Genbank Nucleotide ID

 CAC18368.1; CAC18368.1; CAC18368.1; CAC18368.1 

Protein Name

 DNA-directed RNA polymerase II subunit RPB11-a 

Protein Synonyms/Alias

 RPB11a protein 

Gene Name

 POLR2J1 

Gene Synonyms/Alias

 POLR2J 

Created Date

 July 27, 2013 

Organism

 Homo sapiens (Human) 

NCBI Taxa ID

 9606 

Lysine Modification

Position	Peptide	Type	References
52	IIKSQLLKDPQVLFA	ubiquitination	[1, 2]
62	QVLFAGYKVPHPLEH	ubiquitination	[2]
70	VPHPLEHKIIIRVQT	ubiquitination	[2]
120	GADGVAIKDKQEGIE	ubiquitination	[2]
122	DGVAIKDKQEGIE**	ubiquitination	[2]

Reference

 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 

Functional Description

  

Sequence Annotation

  

Keyword

 Complete proteome; Reference proteome. 

Sequence Source

 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 

Protein Length

 127 AA 

Protein Sequence

Gene Ontology

 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0003899; F:DNA-directed RNA polymerase activity; IEA:InterPro.
 GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. 

Interpro

 IPR009025; DNA-dir_RNA_pol_RBP11-like.
 IPR008193; RNA_pol_Rpb11_13-16kDa_CS. 

Pfam

  

SMART

  

PROSITE

 PS01154; RNA_POL_L_13KD 

PRINTS