CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-027621
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DNA-directed RNA polymerase 
Protein Synonyms/Alias
  
Gene Name
  
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
42ANINFLRKLVQNGPEubiquitination[1]
347TPGQGLLKAKYELLNubiquitination[1]
Reference
 [1] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789] 
Functional Description
  
Sequence Annotation
  
Keyword
 DNA-directed RNA polymerase; Nucleotidyltransferase; Transcription; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 387 AA 
Protein Sequence
GRTVISPDPN LRIDEVAVPV HVAKILTFPE KVNKANINFL RKLVQNGPEV HPGANFIQQR 60
HTQMKRFLKY GNREKMAQEL KYGDIVERHL IDGDVVLFNR QPSLHKLSIM AHLARVKPHR 120
TFRFNECVCT PYNADFDGDE MNLHLPQTEE AKAEALVLMG TKANLVTPRN GEPLIAAIQD 180
FLTGAYLLTL KDTFFDRAKA CQIIASILVG KDEKIKVRLP PPTILKPVTL WTGKQIFSVI 240
LRPSDDNPVR ANLRTKGKQY CGKGEDLCAN DSYVTIQNSE LMSGSMDKGT LGSGSKNNIF 300
YILLRDWGQN EAADAMSRLA RLAPVYLSNR GFSIGIGDVT PGQGLLKAKY ELLNAGYKKC 360
DEYIEALNTG KLQQQPGCTA EETLEAL 387 
Gene Ontology
 GO:0005634; C:nucleus; IEA:InterPro.
 GO:0003682; F:chromatin binding; IEA:Compara.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
 GO:0032549; F:ribonucleoside binding; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR009010; Asp_de-COase-like_dom.
 IPR000722; RNA_pol_asu.
 IPR015700; RNA_pol_III_lsu.
 IPR006592; RNA_pol_N.
 IPR007066; RNA_pol_Rpb1_3. 
Pfam
 PF00623; RNA_pol_Rpb1_2
 PF04983; RNA_pol_Rpb1_3 
SMART
 SM00663; RPOLA_N 
PROSITE
  
PRINTS