CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002439
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Valine--tRNA ligase 
Protein Synonyms/Alias
 Valyl-tRNA synthetase; ValRS 
Gene Name
 valS 
Gene Synonyms/Alias
 b4258; JW4215 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
3*****MEKTYNPQDIacetylation[1]
20PLYEHWEKQGYFKPNacetylation[1]
113GREAFIDKIWEWKAEacetylation[1]
118IDKIWEWKAESGGTIacetylation[1]
154EGLSNAVKEVFVRLYacetylation[1]
162EVFVRLYKEDLIYRGacetylation[1]
178RLVNWDPKLRTAISDacetylation[1, 2]
214GAKTADGKDYLVVATacetylation[1]
243NPEDPRYKDLIGKYVacetylation[1]
248RYKDLIGKYVILPLVacetylation[1]
271DEHADMEKGTGCVKIacetylation[1]
291FNDYEVGKRHALPMIacetylation[1]
317SAQVFDTKGNESDVYacetylation[1]
334EIPAEFQKLERFAARacetylation[1]
358LGLLEEIKPHDLTVPacetylation[1]
391VRADVLAKPAVEAVEacetylation[1]
554IRDDEGQKMSKSKGNacetylation[1]
557DEGQKMSKSKGNVIDacetylation[1]
559GQKMSKSKGNVIDPLacetylation[1]
593MQPQLADKIRKRTEKacetylation[1]
600KIRKRTEKQFPNGIEacetylation[1]
633RDINWDMKRLEGYRNacetylation[1]
644GYRNFCNKLWNASRFacetylation[1]
820EMNIAPGKPLELLLRacetylation[1, 2]
861TVLPADDKGPVSVTKacetylation[1]
898RLAKEVAKIEGEISRacetylation[1]
909EISRIENKLANEGFVacetylation[1, 2]
926APEAVIAKEREKLEGacetylation[1]
930VIAKEREKLEGYAEAacetylation[1]
940GYAEAKAKLIEQQAVacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
 Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a "posttransfer" editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner. 
Sequence Annotation
 MOTIF 42 52 "HIGH" region.
 MOTIF 554 558 "KMSKS" region.
 BINDING 557 557 ATP (By similarity).  
Keyword
 Aminoacyl-tRNA synthetase; ATP-binding; Coiled coil; Complete proteome; Cytoplasm; Direct protein sequencing; Ligase; Nucleotide-binding; Protein biosynthesis; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 951 AA 
Protein Sequence
MEKTYNPQDI EQPLYEHWEK QGYFKPNGDE SQESFCIMIP PPNVTGSLHM GHAFQQTIMD 60
TMIRYQRMQG KNTLWQVGTD HAGIATQMVV ERKIAAEEGK TRHDYGREAF IDKIWEWKAE 120
SGGTITRQMR RLGNSVDWER ERFTMDEGLS NAVKEVFVRL YKEDLIYRGK RLVNWDPKLR 180
TAISDLEVEN RESKGSMWHI RYPLADGAKT ADGKDYLVVA TTRPETLLGD TGVAVNPEDP 240
RYKDLIGKYV ILPLVNRRIP IVGDEHADME KGTGCVKITP AHDFNDYEVG KRHALPMINI 300
LTFDGDIRES AQVFDTKGNE SDVYSSEIPA EFQKLERFAA RKAVVAAVDA LGLLEEIKPH 360
DLTVPYGDRG GVVIEPMLTD QWYVRADVLA KPAVEAVENG DIQFVPKQYE NMYFSWMRDI 420
QDWCISRQLW WGHRIPAWYD EAGNVYVGRN EDEVRKENNL GADVVLRQDE DVLDTWFSSA 480
LWTFSTLGWP ENTDALRQFH PTSVMVSGFD IIFFWIARMI MMTMHFIKDE NGKPQVPFHT 540
VYMTGLIRDD EGQKMSKSKG NVIDPLDMVD GISLPELLEK RTGNMMQPQL ADKIRKRTEK 600
QFPNGIEPHG TDALRFTLAA LASTGRDINW DMKRLEGYRN FCNKLWNASR FVLMNTEGQD 660
CGFNGGEMTL SLADRWILAE FNQTIKAYRE ALDSFRFDIA AGILYEFTWN QFCDWYLELT 720
KPVMNGGTEA ELRGTRHTLV TVLEGLLRLA HPIIPFITET IWQRVKVLCG ITADTIMLQP 780
FPQYDASQVD EAALADTEWL KQAIVAVRNI RAEMNIAPGK PLELLLRGCS ADAERRVNEN 840
RGFLQTLARL ESITVLPADD KGPVSVTKII DGAELLIPMA GLINKEDELA RLAKEVAKIE 900
GEISRIENKL ANEGFVARAP EAVIAKEREK LEGYAEAKAK LIEQQAVIAA L 951 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
 GO:0005524; F:ATP binding; IEA:HAMAP.
 GO:0004832; F:valine-tRNA ligase activity; IEA:HAMAP.
 GO:0006450; P:regulation of translational fidelity; IEA:GOC.
 GO:0006438; P:valyl-tRNA aminoacylation; IEA:HAMAP. 
Interpro
 IPR001412; aa-tRNA-synth_I_CS.
 IPR002300; aa-tRNA-synth_Ia.
 IPR014729; Rossmann-like_a/b/a_fold.
 IPR010978; tRNA-bd_arm.
 IPR009080; tRNAsynth_1a_anticodon-bd.
 IPR013155; V/L/I-tRNA-synth_anticodon-bd.
 IPR019499; Val-tRNA_synth_tRNA-bd.
 IPR009008; Val/Leu/Ile-tRNA-synth_edit.
 IPR002303; Valyl-tRNA_ligase. 
Pfam
 PF08264; Anticodon_1
 PF00133; tRNA-synt_1
 PF10458; Val_tRNA-synt_C 
SMART
  
PROSITE
 PS00178; AA_TRNA_LIGASE_I 
PRINTS
 PR00986; TRNASYNTHVAL.