CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005118
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Thioredoxin-2 
Protein Synonyms/Alias
 Thioredoxin II; TR-II; Thioredoxin-1 
Gene Name
 TRX2 
Gene Synonyms/Alias
 TRX1; YGR209C; G7746 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
43MIAPMIEKFAEQYSDacetylation[1]
55YSDAAFYKLDVDEVSacetylation[1]
67EVSDVAQKAEVSSMPubiquitination[2, 3]
97GANPAAIKQAIASNVacetylation[1]
97GANPAAIKQAIASNVubiquitination[2, 3]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919]
 [2] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047]
 [3] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Participates as a hydrogen donor in redox reactions through the reversible oxidation of its active center dithiol to a disulfide, accompanied by the transfer of 2 electrons and 2 protons. It is involved in many cellular processes, including deoxyribonucleotide synthesis, repair of oxidatively damaged proteins, protein folding, sulfur metabolism, and redox homeostasis. Thioredoxin-dependent enzymes include phosphoadenosine-phosphosulfate reductase MET16, alkyl- hydroperoxide reductase DOT5, thioredoxin peroxidases TSA1 and TSA2, alkyl hydroperoxide reductase AHP1, and peroxiredoxin HYR1. Thioredoxin is also involved in protection against reducing stress. As part of the LMA1 complex, it is involved in the facilitation of vesicle fusion such as homotypic vacuole and ER- derived COPII vesicle fusion with the Golgi. This activity does not require the redox mechanism. Through its capacity to inactivate the stress response transcription factor YAP1 and its regulator the hydroperoxide stress sensor HYR1, it is involved in feedback regulation of stress response gene expression upon oxidative stress. 
Sequence Annotation
 DOMAIN 2 104 Thioredoxin.
 ACT_SITE 31 31 Nucleophile.
 ACT_SITE 34 34 Nucleophile.
 MOD_RES 62 62 Phosphoserine.
 DISULFID 31 34 Redox-active.  
Keyword
 3D-structure; Complete proteome; Cytoplasm; Deoxyribonucleotide synthesis; Direct protein sequencing; Disulfide bond; Electron transport; Golgi apparatus; Membrane; Nucleus; Phosphoprotein; Protein transport; Redox-active center; Reference proteome; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 104 AA 
Protein Sequence
MVTQLKSASE YDSALASGDK LVVVDFFATW CGPCKMIAPM IEKFAEQYSD AAFYKLDVDE 60
VSDVAQKAEV SSMPTLIFYK GGKEVTRVVG ANPAAIKQAI ASNV 104 
Gene Ontology
 GO:0005829; C:cytosol; IDA:SGD.
 GO:0000324; C:fungal-type vacuole; IPI:SGD.
 GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0015036; F:disulfide oxidoreductase activity; ISS:SGD.
 GO:0009055; F:electron carrier activity; IEA:InterPro.
 GO:0015035; F:protein disulfide oxidoreductase activity; IEA:InterPro.
 GO:0045454; P:cell redox homeostasis; TAS:SGD.
 GO:0034599; P:cellular response to oxidative stress; ISS:SGD.
 GO:0009263; P:deoxyribonucleotide biosynthetic process; IEA:UniProtKB-KW.
 GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.
 GO:0006888; P:ER to Golgi vesicle-mediated transport; IDA:SGD.
 GO:0006662; P:glycerol ether metabolic process; IEA:InterPro.
 GO:0080058; P:protein deglutathionylation; IDA:SGD.
 GO:0015031; P:protein transport; IEA:UniProtKB-KW.
 GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IDA:SGD.
 GO:0000103; P:sulfate assimilation; IGI:SGD.
 GO:0042144; P:vacuole fusion, non-autophagic; IDA:SGD.
 GO:0000011; P:vacuole inheritance; IMP:SGD. 
Interpro
 IPR005746; Thioredoxin.
 IPR012336; Thioredoxin-like_fold.
 IPR017937; Thioredoxin_CS.
 IPR013766; Thioredoxin_domain. 
Pfam
 PF00085; Thioredoxin 
SMART
  
PROSITE
 PS00194; THIOREDOXIN_1
 PS51352; THIOREDOXIN_2 
PRINTS
 PR00421; THIOREDOXIN.