CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-018351
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 DNA-binding death effector domain-containing protein 2 
Protein Synonyms/Alias
 DED-containing protein FLAME-3; FADD-like anti-apoptotic molecule 3 
Gene Name
 DEDD2 
Gene Synonyms/Alias
 FLAME3; PSEC0004 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
155ETGSPPTKRQRRSRGubiquitination[1]
193ARPSSEGKVTCDIRLubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 May play a critical role in death receptor-induced apoptosis and may target CASP8 and CASP10 to the nucleus. May regulate degradation of intermediate filaments during apoptosis. May play a role in the general transcription machinery in the nucleus and might be an important regulator of the activity of GTF3C3. 
Sequence Annotation
 DOMAIN 25 104 DED.
 MOTIF 104 109 Nuclear localization signal (Potential).
 MOTIF 155 173 Bipartite nuclear localization signal  
Keyword
 Alternative splicing; Apoptosis; Complete proteome; DNA-binding; Nucleus; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 326 AA 
Protein Sequence
MALSGSTPAP CWEEDECLDY YGMLSLHRMF EVVGGQLTEC ELELLAFLLD EAPGAAGGLA 60
RARSGLELLL ELERRGQCDE SNLRLLGQLL RVLARHDLLP HLARKRRRPV SPERYSYGTS 120
SSSKRTEGSC RRRRQSSSSA NSQQGQWETG SPPTKRQRRS RGRPSGGARR RRRGAPAAPQ 180
QQSEPARPSS EGKVTCDIRL RVRAEYCEHG PALEQGVASR RPQALARQLD VFGQATAVLR 240
SRDLGSVVCD IKFSELSYLD AFWGDYLSGA LLQALRGVFL TEALREAVGR EAVRLLVSVD 300
EADYEAGRRR LLLMEEEGGR RPTEAS 326 
Gene Ontology
 GO:0005730; C:nucleolus; IDA:UniProtKB.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0030159; F:receptor signaling complex scaffold activity; NAS:UniProtKB.
 GO:0030262; P:apoptotic nuclear changes; IDA:UniProtKB.
 GO:0019725; P:cellular homeostasis; NAS:UniProtKB.
 GO:0008625; P:extrinsic apoptotic signaling pathway via death domain receptors; IMP:UniProtKB.
 GO:0035556; P:intracellular signal transduction; NAS:UniProtKB.
 GO:0045892; P:negative regulation of transcription, DNA-dependent; NAS:UniProtKB.
 GO:2001238; P:positive regulation of extrinsic apoptotic signaling pathway; IMP:UniProtKB.
 GO:0006396; P:RNA processing; NAS:UniProtKB.
 GO:0016075; P:rRNA catabolic process; NAS:UniProtKB.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR011029; DEATH-like_dom.
 IPR001875; DED. 
Pfam
 PF01335; DED 
SMART
 SM00031; DED 
PROSITE
 PS50168; DED 
PRINTS