CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-026607
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein Rdbp 
Protein Synonyms/Alias
 RCG38266, isoform CRA_a; RD RNA-binding protein; Rdbp protein 
Gene Name
 Nelfe 
Gene Synonyms/Alias
 Apom; Bat4; C2; C4a; Cfb; Csnk2b; G7e; Hspa1a; Hspa1b; Hspa1l; Ly6g5c; Ly6g6c; Neu1; Ng35; Rdbp; Rps25-ps2; Stk19; rCG_38266 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
18EEEALQKKFNKLKKKacetylation[1]
33KKALLALKKQSSSGTacetylation[1]
95RSRTLEGKLKDPEKGacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 369 AA 
Protein Sequence
MLVIPPGLSE EEEALQKKFN KLKKKKKALL ALKKQSSSGT ASQGGVKRSL SEQPVVDTAT 60
ATEQAKQLVK SGAISAIKAE TKNSGFKRSR TLEGKLKDPE KGPVPTFQPF QRSMSADEDL 120
QEPSRRPQRK SLYESFVSSS DRLRELGQDG EEAEAPGAGE GPPRGFDWSY EEHSGARSSA 180
SPPRSRSRDR SHDRSRDRDR DKERDRDRDR DRERDKDKDR DRDRDRDKER DRDRDRERDR 240
EGPFRRSDSF PERRAPRKGN TLYVYGEDMT PTLLRGAFSP FGNIIDLSMD PPRNCAFVTY 300
EKMESADQAV AELNGTQVES VQLKVNIARK QPMLDAATGK SVWGSLAVQN SPKGCHRDKR 360
TQIVYSDDL 369 
Gene Ontology
 GO:0005739; C:mitochondrion; IEA:Compara.
 GO:0032021; C:NELF complex; IEA:Compara.
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0034244; P:negative regulation of transcription elongation from RNA polymerase II promoter; IEA:Compara. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR000504; RRM_dom. 
Pfam
 PF00076; RRM_1 
SMART
 SM00360; RRM 
PROSITE
 PS50102; RRM 
PRINTS