CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-029428
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Meckel syndrome type 1 protein 
Protein Synonyms/Alias
  
Gene Name
 MKS1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
113QYRQEILKLENSGGKubiquitination[1]
178GMEGGILKSRIVTWEubiquitination[1, 2, 3]
215ADLGPYKKLGYKKYEubiquitination[1]
220YKKLGYKKYEHVLCTubiquitination[1]
239SNGVITVKPDFTGLKubiquitination[1, 2]
246KPDFTGLKGPYRIETubiquitination[1]
257RIETEGEKQELWKYTubiquitination[1, 2, 3]
262GEKQELWKYTIDNVSubiquitination[1]
285ERERRVFKDLYGRHKubiquitination[1, 2]
292KDLYGRHKEYLSSLVubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 521 AA 
Protein Sequence
MAETVWSTDT GEAVYRSRDP VRNLRLRVHL QRITSSNFLH YQPAAELGKD LIDLATFRPQ 60
PTASGHRPEE DEEEEIVIGW QEKLFSQFEV DLYQNETACQ SPLDYQYRQE ILKLENSGGK 120
KNRRIFTYTD SDRYTNLEEH CQRMTTAASE VPSFLVERMA NVRRRRQDRR GMEGGILKSR 180
IVTWEPSEEF VRNNHVINTP LQTMHIMADL GPYKKLGYKK YEHVLCTLKV DSNGVITVKP 240
DFTGLKGPYR IETEGEKQEL WKYTIDNVSP HAQPEEEERE RRVFKDLYGR HKEYLSSLVG 300
TDFEMTVPGA LRLFVNGEVV SAQGYEYDNL YVHFFVELPT AHWSSPAFQQ LSGVTQTCTT 360
KSLAMDKVAH FSYPFTFEAF FLHEDESSDA LPEWPVLYCE VLSLDFWQRY RVEGYGAVVL 420
PATPGSHTLT VSTWRPVELG TVAELRRFFI GGSLELEDLS YVRIPGSFKA LLSSSKTKEG 480
RKVDGERVLN PQPVSLSLFP GKPHSTAWGL LRLRYELFLS K 521 
Gene Ontology
  
Interpro
 IPR010796; B9_dom. 
Pfam
 PF07162; B9-C2 
SMART
  
PROSITE
 PS51381; B9 
PRINTS