CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-033672
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Nuclear factor 1 
Protein Synonyms/Alias
  
Gene Name
 NFIX 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
63KDELLGEKPEIKQKWubiquitination[1]
Reference
 [1] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
 Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication (By similarity). 
Sequence Annotation
  
Keyword
 Activator; Complete proteome; DNA replication; DNA-binding; Nucleus; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 460 AA 
Protein Sequence
MLPACRLQDE FHPFIEALLP HVRAFSYTWF NLQARKRKYF KKHEKRMSKD EERAVKDELL 60
GEKPEIKQKW ASRLLAKLRK DIRPEFREDF VLTITGKKPP CCVLSNPDQK GKIRRIDCLR 120
QADKVWRLDL VMVILFKGIP LESTDGERLY KSPQCSNPGL CVQPHHIGVT IKELDLYLAY 180
FVHTPESGQS DSSNQQGDAD IKPLPNGHLS FQDCFVTSGV WNVTELVRVS QTPVATASGP 240
NFSLADLESP SYYNINQVTL GRRSITSPPS TSTTKRPKSI DDSEMESPVD DVFYPGTGRS 300
PAAGSSQSSG WPNDVDAGSP RATASALHFP STSIIQQSSP YFTHPTIRYH HHHGQDSLKE 360
FVQFVCSDGS GQATGQPNGS GQGKVPGSFL LPPPPPVARP VPLPMPDSKS TSTAPDGAAL 420
TPPSPSFATT GASSANRFVS IGPRDGNFLN IPQQSQSWFL 460 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
 GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR000647; CTF/NFI.
 IPR020604; CTF/NFI_DNA-bd-dom.
 IPR019739; CTF/NFI_DNA-bd_CS.
 IPR019548; CTF/NFI_DNA-bd_N.
 IPR003619; MAD_homology1_Dwarfin-type. 
Pfam
 PF00859; CTF_NFI
 PF03165; MH1
 PF10524; NfI_DNAbd_pre-N 
SMART
 SM00523; DWA 
PROSITE
 PS00349; CTF_NFI_1
 PS51080; CTF_NFI_2 
PRINTS