CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003888
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial 
Protein Synonyms/Alias
 PDHE1-B 
Gene Name
 PDHB 
Gene Synonyms/Alias
 PHE1B 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
50AQYDGAYKVSRGLWKubiquitination[1]
166PWNSEDAKGLIKSAIubiquitination[1]
209DFLIPIGKAKIERQGubiquitination[1]
318DVPMPYAKILEDNSIubiquitination[1]
329DNSIPQVKDIIFAIKubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2), and thereby links the glycolytic pathway to the tricarboxylic cycle. 
Sequence Annotation
 BINDING 89 89 Thiamine pyrophosphate.
 MOD_RES 67 67 Phosphotyrosine (By similarity).  
Keyword
 3D-structure; Alternative splicing; Carbohydrate metabolism; Complete proteome; Direct protein sequencing; Disease mutation; Glucose metabolism; Mitochondrion; Oxidoreductase; Phosphoprotein; Polymorphism; Pyruvate; Reference proteome; Thiamine pyrophosphate; Transit peptide; Tricarboxylic acid cycle. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 359 AA 
Protein Sequence
MAAVSGLVRR PLREVTVRDA INQGMDEELE RDEKVFLLGE EVAQYDGAYK VSRGLWKKYG 60
DKRIIDTPIS EMGFAGIAVG AAMAGLRPIC EFMTFNFSMQ AIDQVINSAA KTYYMSGGLQ 120
PVPIVFRGPN GASAGVAAQH SQCFAAWYGH CPGLKVVSPW NSEDAKGLIK SAIRDNNPVV 180
VLENELMYGV PFEFPPEAQS KDFLIPIGKA KIERQGTHIT VVSHSRPVGH CLEAAAVLSK 240
EGVECEVINM RTIRPMDMET IEASVMKTNH LVTVEGGWPQ FGVGAEICAR IMEGPAFNFL 300
DAPAVRVTGA DVPMPYAKIL EDNSIPQVKD IIFAIKKTLN I 341 
Gene Ontology
 GO:0005759; C:mitochondrial matrix; TAS:Reactome.
 GO:0045254; C:pyruvate dehydrogenase complex; IDA:UniProtKB.
 GO:0004739; F:pyruvate dehydrogenase (acetyl-transferring) activity; TAS:ProtInc.
 GO:0006086; P:acetyl-CoA biosynthetic process from pyruvate; IDA:UniProtKB.
 GO:0006006; P:glucose metabolic process; IEA:UniProtKB-KW.
 GO:0010510; P:regulation of acetyl-CoA biosynthetic process from pyruvate; TAS:Reactome.
 GO:0006099; P:tricarboxylic acid cycle; IDA:UniProtKB. 
Interpro
 IPR027110; PDHB.
 IPR009014; Transketo_C/Pyr-ferredox_oxred.
 IPR015941; Transketolase-like_C.
 IPR005475; Transketolase-like_Pyr-bd.
 IPR005476; Transketolase_C. 
Pfam
 PF02779; Transket_pyr
 PF02780; Transketolase_C 
SMART
 SM00861; Transket_pyr 
PROSITE
  
PRINTS