CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-044777
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Zinc finger protein 562 
Protein Synonyms/Alias
  
Gene Name
 ZNF562 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
24CPFEEKTKIGTMVEDubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Metal-binding; Reference proteome; Repeat; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 425 AA 
Protein Sequence
MSAFDMSHGF FPREPICPFE EKTKIGTMVE DHRSNSYQDS VTFDDVAVEF TPEEWALLDT 60
TQKYLYRDVM LENYMNLASV DFFFCLTSEW EIQPRTKRSS LQQGFLKNQI FTGIQMTRSY 120
SGWKLCENCG EVFSEQFCLK THMRAQNGGN TFEGNCYGKD SISVHKEASI GQELSKFNPC 180
GKVFTLTPGL AVHLEILNGR QPYKCKECGK GFKYFASLDN HMGIHIGEKL CEFQECERAI 240
TTSSHLKQCV AVHTGKKSEK TKNCGKSFTN FSQLSAHAKT HKGEKSFECK ECGRSFRNSS 300
SFNVHIQIHT GIKPHKCTEC GKAFTRSTHL TQHVRTHTGI KPYECKECGQ AFTQYTGLAI 360
HIRNHTGEKP YQCKECGKAF NRSSTLTQHR RIHTGEKPYE CVECGKTFIT SSHRSKHLKT 420
HSGER 425 
Gene Ontology
 GO:0005622; C:intracellular; IEA:InterPro.
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR001909; Krueppel-associated_box.
 IPR007087; Znf_C2H2.
 IPR015880; Znf_C2H2-like.
 IPR013087; Znf_C2H2/integrase_DNA-bd. 
Pfam
 PF01352; KRAB
 PF00096; zf-C2H2 
SMART
 SM00349; KRAB
 SM00355; ZnF_C2H2 
PROSITE
 PS50805; KRAB
 PS00028; ZINC_FINGER_C2H2_1
 PS50157; ZINC_FINGER_C2H2_2 
PRINTS