CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003360
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 cAMP receptor protein 
Protein Synonyms/Alias
 Crp; Catabolite gene activator; CAP; cAMP regulatory protein 
Gene Name
 crp 
Gene Synonyms/Alias
 cap; csm; b3357; JW5702 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
5***MVLGKPQTDPTLacetylation[1]
23LSHCHIHKYPSKSTLacetylation[1]
27HIHKYPSKSTLIHQGacetylation[1]
36TLIHQGEKAETLYYIacetylation[1]
53GSVAVLIKDEEGKEMacetylation[1, 2]
90RSAWVRAKTACEVAEacetylation[1]
101EVAEISYKKFRQLIQacetylation[1, 3, 4]
102VAEISYKKFRQLIQVacetylation[1]
131RLQVTSEKVGNLAFLacetylation[1]
153QTLLNLAKQPDAMTHacetylation[1]
167HPDGMQIKITRQEIGacetylation[1, 4]
189ETVGRILKMLEDQNLacetylation[1]
202NLISAHGKTIVVYGTacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] The diversity of lysine-acetylated proteins in Escherichia coli.
 Yu BJ, Kim JA, Moon JH, Ryu SE, Pan JG.
 J Microbiol Biotechnol. 2008 Sep;18(9):1529-36. [PMID: 18852508]
 [3] Lysine acetylation is a highly abundant and evolutionarily conserved modification in Escherichia coli.
 Zhang J, Sprung R, Pei J, Tan X, Kim S, Zhu H, Liu CF, Grishin NV, Zhao Y.
 Mol Cell Proteomics. 2009 Feb;8(2):215-25. [PMID: 18723842]
 [4] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
 This protein complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons. The protein induces a severe bend in the DNA. Acts as a negative regulator of its own synthesis as well as for adenylate cyclase (cyaA), which generates cAMP. 
Sequence Annotation
 DOMAIN 138 210 HTH crp-type.
 NP_BIND 10 133 cAMP.
 DNA_BIND 170 189 H-T-H motif.
 BINDING 129 129 cAMP.
 MOD_RES 101 101 N6-acetyllysine.  
Keyword
 3D-structure; Acetylation; Activator; cAMP; cAMP-binding; Complete proteome; Direct protein sequencing; DNA-binding; Nucleotide-binding; Reference proteome; Repressor; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 210 AA 
Protein Sequence
MVLGKPQTDP TLEWFLSHCH IHKYPSKSTL IHQGEKAETL YYIVKGSVAV LIKDEEGKEM 60
ILSYLNQGDF IGELGLFEEG QERSAWVRAK TACEVAEISY KKFRQLIQVN PDILMRLSAQ 120
MARRLQVTSE KVGNLAFLDV TGRIAQTLLN LAKQPDAMTH PDGMQIKITR QEIGQIVGCS 180
RETVGRILKM LEDQNLISAH GKTIVVYGTR 210 
Gene Ontology
 GO:0005622; C:intracellular; IEA:InterPro.
 GO:0030552; F:cAMP binding; IEA:UniProtKB-KW.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
 GO:0045013; P:carbon catabolite repression of transcription; IMP:EcoCyc.
 GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:EcoliWiki.
 GO:0006351; P:transcription, DNA-dependent; IDA:EcoCyc. 
Interpro
 IPR018490; cNMP-bd-like.
 IPR018488; cNMP-bd_CS.
 IPR000595; cNMP-bd_dom.
 IPR012318; HTH_CRP_2.
 IPR014710; RmlC-like_jellyroll.
 IPR001808; Tscrpt_reg_HTH_Crp.
 IPR018335; Tscrpt_reg_HTH_Crp-type_CS.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF00027; cNMP_binding
 PF00325; Crp 
SMART
 SM00100; cNMP
 SM00419; HTH_CRP 
PROSITE
 PS00888; CNMP_BINDING_1
 PS00889; CNMP_BINDING_2
 PS50042; CNMP_BINDING_3
 PS00042; HTH_CRP_1
 PS51063; HTH_CRP_2 
PRINTS
 PR00034; HTHCRP.