CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008650
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein NNF2 
Protein Synonyms/Alias
  
Gene Name
 NNF2 
Gene Synonyms/Alias
 YGR089W 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
10EQFTNQKKVSHLQSLubiquitination[1, 2, 3]
Reference
 [1] A proteomics approach to understanding protein ubiquitination.
 Peng J, Schwartz D, Elias JE, Thoreen CC, Cheng D, Marsischky G, Roelofs J, Finley D, Gygi SP.
 Nat Biotechnol. 2003 Aug;21(8):921-6. [PMID: 12872131]
 [2] Computational identification of ubiquitylation sites from protein sequences.
 Tung CW, Ho SY.
 BMC Bioinformatics. 2008 Jul 15;9:310. [PMID: 18625080]
 [3] Identification, analysis, and prediction of protein ubiquitination sites.
 Radivojac P, Vacic V, Haynes C, Cocklin RR, Mohan A, Heyen JW, Goebl MG, Iakoucheva LM.
 Proteins. 2010 Feb 1;78(2):365-80. [PMID: 19722269] 
Functional Description
  
Sequence Annotation
 CROSSLNK 10 10 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 Complete proteome; Endoplasmic reticulum; Isopeptide bond; Membrane; Reference proteome; Transmembrane; Transmembrane helix; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 936 AA 
Protein Sequence
MEEQFTNQKK VSHLQSLMNT KRSEQPTEFA KKHRFKDTLA LFLVFLSFNH FTSLCLLVSF 60
IVATKCKDFL ANCFIILFLS KKPSRHIGEV AHIDISTSKV TNGSSNRKSN SRFFGNSKNS 120
FVIPIPVLIC EILFAMLLKI YGGDYFVKPI KNLAISIIAS FLINDPSDCL SYATSCSVLY 180
AVSTNTFQRV SHFFDIIQLF DMSLRGTGQS IKLFTVFRKY SQFFKKLFSL FLPMPFKMLG 240
KHSDSMIYYL SFHILFFSFA SSLLHPHRQT AENKPLKKGF NSTKPDVARV QGLQKMRISS 300
SSSVSADSNT LEDQSPMIPN DPGGLSSSNQ TIHPSQQNNS PVPLSSHSNI LNPAASYPTD 360
ATSSFPYFTS MVKEYKSYQP SVISAEGSNS QAVTTTTSTT TSPTTFNFSG DNTSLSNEIS 420
LSDSSNGNSK KDSDFFSPSN DKYTNQLFEL NVDFGNMFSS SKLSSDISVT SNLENFIRLL 480
FRRKNQHLIA PLWSMVVTLK TTNFEKKYLQ ETSENSLTPT NSNTSYVSNQ EKHDKDLDTI 540
NTHSVSSRIS FTHAGKFKKS VFNNFEPSNT MALIAKTTSD DYNLLNLVST NENIFNRNDN 600
DYKVCIIDIS TNSITFHIEN LHDGELIVLV NGVIWSEVSC ALILEHVGEE YVVVNGLVPS 660
CSYDIQFINR LNHRDDYLVS DLIVRTCGNN NAIAGKFENL DFSFPSYYHR KFLSPLLTLK 720
HSVLTTNANL SDERTKLKKT KKEFSKKLSL LRQEIDYFKG RISQNATHDE KSTLKVENLK 780
VALQQSETAV NKLEMQLKTL TEKELELEEE YLKKKDLHLK NQLEFSKLEE SLSKDLKNSE 840
GRFQKVNQEL VQLGSKLDKL NARNEKLQKE VDQNAEEIEK FSTQFLSKRE KDRFRRKEYR 900
IREANKFELT IKGLEQDINR LENENENIHS LIGNSY 936 
Gene Ontology
 GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
 GO:0016021; C:integral to membrane; ISM:SGD. 
Interpro
  
Pfam
  
SMART
  
PROSITE
  
PRINTS