CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008882
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Uncharacterized HTH-type transcriptional regulator YfiF 
Protein Synonyms/Alias
  
Gene Name
 yfiF 
Gene Synonyms/Alias
 BSU08250 
Created Date
 July 27, 2013 
Organism
 Bacillus subtilis (strain 168) 
NCBI Taxa ID
 224308 
Lysine Modification
Position
Peptide
Type
References
258KSTNLSIKEIAEEIGacetylation[1]
Reference
 [1] The acetylproteome of Gram-positive model bacterium Bacillus subtilis.
 Kim D, Yu BJ, Kim JA, Lee YJ, Choi SG, Kang S, Pan JG.
 Proteomics. 2013 May;13(10-11):1726-36. [PMID: 23468065
Functional Description
  
Sequence Annotation
 DNA_BIND 208 227 H-T-H motif (By similarity).  
Keyword
 Complete proteome; DNA-binding; Reference proteome; Transcription; Transcription regulation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 314 AA 
Protein Sequence
MELNHLVTGK IALNQYVHRL EQKDVSFYVH YWGAMTNHYN TLLHKHSFYE ICYVVRGEGY 60
YLEGDRTYPL REQTIFLSKP EHLHQIKSET GLFLFYVAFE LSEDQSSAEW IKVMEEVKQS 120
PFITMQLKDG EPPGLLWKTL MLQAAQPVNA FDKEILSHLS HALILSLIQT FLPYAQRPKQ 180
KQPIHTSSAL LTEVKLHIKD NLSQPLKLTD VASHFHISGR HLSRLFAAEL GVSYSEFVQN 240
EKINKAAELL KSTNLSIKEI AEEIGFSVHY FTRVFSAKIG SSPGLFRSLY KDSKMTAFQI 300
NKPFQKIEQA KPHE 314 
Gene Ontology
 GO:0005622; C:intracellular; IEA:InterPro.
 GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR009057; Homeodomain-like.
 IPR018060; HTH_AraC.
 IPR018062; HTH_AraC-typ_CS.
 IPR003313; Tscrpt_reg_HTH_AraC-bd. 
Pfam
 PF02311; AraC_binding 
SMART
 SM00342; HTH_ARAC 
PROSITE
 PS00041; HTH_ARAC_FAMILY_1
 PS01124; HTH_ARAC_FAMILY_2 
PRINTS