CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-033979
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Lysine-specific demethylase 2B 
Protein Synonyms/Alias
  
Gene Name
 Kdm2b 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
819DRLSLANKPLRRFKQacetylation[1]
Reference
 [1] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Metal-binding; Nucleus; Reference proteome; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1271 AA 
Protein Sequence
MEAEKDSGRR LRAIDRQRYD ENEDLSDVEE IVSVRGFSLE EKLRSQLYQG DFVHAMEGKD 60
FNYEYVQREA LRVPLVFRDK DGLGIKMPDP DFTVRDVKLL VGSRRLVDVM DVNTQKGTEM 120
SMSQFVRYYE TPEAQRDKLY NVISLEFSHT KLEHLVKRPT VVDLVDWVDN MWPQHLKEKQ 180
TEATNALAEM KYPKVKKYCL MSVKGCFTDF HIDFGGTSVW YHVFRGGKIF WLIPPTLHNL 240
ALYEEWVLSG KQSDIFLGDR VERCQRIELK QGYTFFIPSG WIHAVYTPVD SLVFGGNILH 300
SFNVPMQLRI YEIEDRTRVQ PKFRYPFYYE MCWYVLERYV YCVTQRSYLT QEYQRELMLI 360
DAPRKTSVDG FSSDSWLDME EESCEQQPQE EEEEEEDKEE EGDGADKTPK PPTDDPTSPT 420
STPPEDQDST GKKPKAPAIR FLKRTLSNES EESVKSTSMP TDDPKTPTGS PATEVSTKWT 480
HLTEFELKGL KALVEKLESL PENKKCVPEG IEDPQALLEG VKNVLKEHVD DDPTLAITGV 540
PVVSWPKKTA KNRVVGRPKG KLGPASAVKL AANRTTAGAR RRRTRCRKCE ACLRTECGEC 600
HFCKDMKKFG GPGRMKQSCI MRQCIAPVLP HTAVCLVCGE AGKEDTVEEE EGKFNLMLME 660
CSICNEIIHP GCLKIKESEG VVNDELPNCW ECPKCNHAGK TGKQKRGPGF KYASNLPGSL 720
LKEQKMNRDN KEGQEPAKRR SECEEAPRRR SDEHPKKVPA DGILRRKSDD VHLRRKRKYE 780
KPQELSGRKR LKPGKEDKLF RKKRRSWKNA EDRLSLANKP LRRFKQEPED DLPEAPPKTR 840
ESDQSRSSSP TAGPSTEGAE GPEEKKKVKM RRKRRLVNKE LSKELSKELN HEIQKTESTL 900
AHESQQPIKS EPESENDEPK RPLSHCERPH RFSKGLNGTP RELRHSLGPG LRSPPRVMSR 960
PPPSASPPKC IQMERHVIRP PPISPPPDSL PLDDGAAHVM HREVWMAVFS YLSHRDLCVC 1020
MRVCRTWNRW CCDKRLWTRI DLNRCKSITP LMLSGIIRRQ PVSLDLSWTN ISKKQLSWLI 1080
NRLPGLRDLV LSGCSWIAVS ALCSSSCPLL RTLDVQWVEG LKDAQMRDLL SPPTDNRPGQ 1140
MDNRSKLRNI VELRLAGLDI TDVSLRLIIR HMPLLSKLQL SYCNHINDQS INLLTAVGTT 1200
TRDSLTEVNL SDCNKVTDLC LSFFKRCGNI CHIDLRYCKQ VTKEGCEQFI AEMSVSVQFG 1260
QVEEKLLQKL S 1271 
Gene Ontology
 GO:0005634; C:nucleus; IEA:UniProtKB-KW.
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR001810; F-box_dom_cyclin-like.
 IPR003347; JmjC_dom.
 IPR002857; Znf_CXXC.
 IPR011011; Znf_FYVE_PHD.
 IPR001965; Znf_PHD.
 IPR019787; Znf_PHD-finger. 
Pfam
 PF00646; F-box
 PF02008; zf-CXXC 
SMART
 SM00256; FBOX
 SM00558; JmjC
 SM00249; PHD 
PROSITE
 PS51184; JMJC
 PS51058; ZF_CXXC
 PS50016; ZF_PHD_2 
PRINTS