CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-033979
UniProt Accession
D3YVU4_MOUSE
;
D3YVU4
Genbank Protein ID
AC121564
Genbank Nucleotide ID
Protein Name
Lysine-specific demethylase 2B
Protein Synonyms/Alias
Gene Name
Kdm2b
Gene Synonyms/Alias
Created Date
July 27, 2013
Organism
Mus musculus (Mouse)
NCBI Taxa ID
10090
Lysine Modification
Position
Peptide
Type
References
819
DRLSLAN
K
PLRRFKQ
acetylation
[1]
Reference
[1] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
Mol Cell. 2013 Jun 27;50(6):919-30. [
PMID: 23806337
]
Functional Description
Sequence Annotation
Keyword
Complete proteome; Metal-binding; Nucleus; Reference proteome; Zinc; Zinc-finger.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
1271 AA
Protein Sequence
MEAEKDSGRR LRAIDRQRYD ENEDLSDVEE IVSVRGFSLE EKLRSQLYQG DFVHAMEGKD 60
FNYEYVQREA LRVPLVFRDK DGLGIKMPDP DFTVRDVKLL VGSRRLVDVM DVNTQKGTEM 120
SMSQFVRYYE TPEAQRDKLY NVISLEFSHT KLEHLVKRPT VVDLVDWVDN MWPQHLKEKQ 180
TEATNALAEM KYPKVKKYCL MSVKGCFTDF HIDFGGTSVW YHVFRGGKIF WLIPPTLHNL 240
ALYEEWVLSG KQSDIFLGDR VERCQRIELK QGYTFFIPSG WIHAVYTPVD SLVFGGNILH 300
SFNVPMQLRI YEIEDRTRVQ PKFRYPFYYE MCWYVLERYV YCVTQRSYLT QEYQRELMLI 360
DAPRKTSVDG FSSDSWLDME EESCEQQPQE EEEEEEDKEE EGDGADKTPK PPTDDPTSPT 420
STPPEDQDST GKKPKAPAIR FLKRTLSNES EESVKSTSMP TDDPKTPTGS PATEVSTKWT 480
HLTEFELKGL KALVEKLESL PENKKCVPEG IEDPQALLEG VKNVLKEHVD DDPTLAITGV 540
PVVSWPKKTA KNRVVGRPKG KLGPASAVKL AANRTTAGAR RRRTRCRKCE ACLRTECGEC 600
HFCKDMKKFG GPGRMKQSCI MRQCIAPVLP HTAVCLVCGE AGKEDTVEEE EGKFNLMLME 660
CSICNEIIHP GCLKIKESEG VVNDELPNCW ECPKCNHAGK TGKQKRGPGF KYASNLPGSL 720
LKEQKMNRDN KEGQEPAKRR SECEEAPRRR SDEHPKKVPA DGILRRKSDD VHLRRKRKYE 780
KPQELSGRKR LKPGKEDKLF RKKRRSWKNA EDRLSLANKP LRRFKQEPED DLPEAPPKTR 840
ESDQSRSSSP TAGPSTEGAE GPEEKKKVKM RRKRRLVNKE LSKELSKELN HEIQKTESTL 900
AHESQQPIKS EPESENDEPK RPLSHCERPH RFSKGLNGTP RELRHSLGPG LRSPPRVMSR 960
PPPSASPPKC IQMERHVIRP PPISPPPDSL PLDDGAAHVM HREVWMAVFS YLSHRDLCVC 1020
MRVCRTWNRW CCDKRLWTRI DLNRCKSITP LMLSGIIRRQ PVSLDLSWTN ISKKQLSWLI 1080
NRLPGLRDLV LSGCSWIAVS ALCSSSCPLL RTLDVQWVEG LKDAQMRDLL SPPTDNRPGQ 1140
MDNRSKLRNI VELRLAGLDI TDVSLRLIIR HMPLLSKLQL SYCNHINDQS INLLTAVGTT 1200
TRDSLTEVNL SDCNKVTDLC LSFFKRCGNI CHIDLRYCKQ VTKEGCEQFI AEMSVSVQFG 1260
QVEEKLLQKL S 1271
Gene Ontology
GO:0005634
; C:nucleus; IEA:UniProtKB-KW.
GO:0003677
; F:DNA binding; IEA:InterPro.
GO:0008270
; F:zinc ion binding; IEA:InterPro.
Interpro
IPR001810
; F-box_dom_cyclin-like.
IPR003347
; JmjC_dom.
IPR002857
; Znf_CXXC.
IPR011011
; Znf_FYVE_PHD.
IPR001965
; Znf_PHD.
IPR019787
; Znf_PHD-finger.
Pfam
PF00646
; F-box
PF02008
; zf-CXXC
SMART
SM00256
; FBOX
SM00558
; JmjC
SM00249
; PHD
PROSITE
PS51184
; JMJC
PS51058
; ZF_CXXC
PS50016
; ZF_PHD_2
PRINTS