CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-026237
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Tudor and KH domain containing, isoform CRA_a 
Protein Synonyms/Alias
 Tudor and KH domain-containing protein 
Gene Name
 TDRKH 
Gene Synonyms/Alias
 hCG_16924 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
108PVQVCKAKAAIHQILubiquitination[1]
158GAKITCDKESEGTLLubiquitination[1]
177IKISGTQKEVAAAKHubiquitination[1]
183QKEVAAAKHLILEKVubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 557 AA 
Protein Sequence
MSTERTSWTS LSTIQKIALG LGIPASATVA YILYRRYRES REERLTFVGE DDIEIEMRVP 60
QEAVKLIIGR QGANIKQTGA RIDVDTEDVG DERVLLISGF PVQVCKAKAA IHQILTENTP 120
VSEQLSVPQR SVGRIIGRGG ETIRSICKAS GAKITCDKES EGTLLLSRLI KISGTQKEVA 180
AAKHLILEKV SEDEELRKRI AHSAETRVPR KQPISVRRED MTEPGGAGEP ALWKNTSSSM 240
EPTAPLVTPP PKGGGDMAVV VSKEGSWEKP SDDSFQKSEA QAIPEMPMFE IPSPDFSFHA 300
DEYLEVYVSA SEHPNHFWIQ IVGSRSLQLD KLVNEMTQHY ENSVPEDLTV HVGDIVAAPL 360
PTNGSWYRAR VLGTLENGNL DLYFVDFGDN GDCPLKDLRA LRSDFLSLPF QAIECSLARI 420
APSGDQWEEE ALDEFDRLTH CADWKPLVAK ISSYVQTGIS TWPKIYLYDT SNGKKLDIGL 480
ELVHKGYAIE LPEDIEENRA VPDMLKDMAT ETDASLSTLL TETKKSSGEI THTLSCLSLS 540
EAASMSGDDN LEDDYLL 557 
Gene Ontology
 GO:0003723; F:RNA binding; IEA:InterPro. 
Interpro
 IPR004087; KH_dom.
 IPR004088; KH_dom_type_1.
 IPR002999; Tudor. 
Pfam
 PF00013; KH_1
 PF00567; TUDOR 
SMART
 SM00322; KH
 SM00333; TUDOR 
PROSITE
 PS50084; KH_TYPE_1
 PS50304; TUDOR 
PRINTS