CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041624
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Complement C1q subcomponent subunit B 
Protein Synonyms/Alias
 Complement component 1, q subcomponent, beta polypeptide, isoform CRA_b 
Gene Name
 C1qb 
Gene Synonyms/Alias
 rCG_30695 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
142NQAIRFEKVITNVNDacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Collagen; Complete proteome; Reference proteome; Secreted. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 253 AA 
Protein Sequence
MKTQWSEILT PLLLLLLGLL HVSWAQSSCT GSPGIPGVPG IPGVPGSDGK PGTPGIKGEK 60
GLPGLAGDHG ELGEKGDAGI PGIPGKVGPK GPVGPKGAPG PPGPRGPKGD SGDYKATQKV 120
AFSALRTVNS ALRPNQAIRF EKVITNVNDN YEPRSGKFTC KVPGLYYFTY HASSRGNLCV 180
NIVRGRDRDR MQKVLTFCDY AQNTFQVTTG GVVLKLEQEE VVHLQATDKN SLLGVEGANS 240
IFTGFLLFPD MDV 253 
Gene Ontology
 GO:0005581; C:collagen; IEA:UniProtKB-KW.
 GO:0048839; P:inner ear development; IEA:Compara. 
Interpro
 IPR001073; C1q.
 IPR008160; Collagen.
 IPR008983; Tumour_necrosis_fac-like_dom. 
Pfam
 PF00386; C1q
 PF01391; Collagen 
SMART
 SM00110; C1Q 
PROSITE
 PS50871; C1Q 
PRINTS
 PR00007; COMPLEMNTC1Q.