CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004752
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 60S ribosomal protein L13a 
Protein Synonyms/Alias
 Transplantation antigen P198; Tum-P198 antigen 
Gene Name
 Rpl13a 
Gene Synonyms/Alias
 P198; Tstap198-7 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
183RLRKQAEKNVEKKICacetylation[1]
188AEKNVEKKICKFTEVacetylation[1]
191NVEKKICKFTEVLKTacetylation[1]
Reference
 [1] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123
Functional Description
 Associated with ribosomes but is not required for canonical ribosome function and has extra-ribosomal functions (By similarity). Component of the GAIT (gamma interferon-activated inhibitor of translation) complex which mediates interferon-gamma- induced transcript-selective translation inhibition in inflammation processes. Upon interferon-gamma activation and subsequent phosphorylation dissociates from the ribosome and assembles into the GAIT complex which binds to stem loop- containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs (such as ceruplasmin) and suppresses their translation. In the GAIT complex interacts with m7G cap-bound eIF4G at or near the eIF3-binding site and blocks the recruitment of the 43S ribosomal complex. 
Sequence Annotation
 MOD_RES 2 2 N-acetylalanine.
 MOD_RES 77 77 Phosphoserine; by ZIPK/DAPK3.
 MOD_RES 191 191 N6-acetyllysine (By similarity).  
Keyword
 Acetylation; Complete proteome; Direct protein sequencing; Phosphoprotein; Polymorphism; Reference proteome; Ribonucleoprotein; Ribosomal protein; Translation regulation; Tumor antigen. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 203 AA 
Protein Sequence
MAEGQVLVLD GRGHLLGRLA AIVAKQVLLG RKVVVVRCEG INISGNFYRN KLKYLAFLRK 60
RMNTNPSRGP YHFRAPSRIF WRTVRGMLPH KTKRGQAALE RLKVLDGIPP PYDKKKRMVV 120
PAALKVVRLK PTRKFAYLGR LAHEVGWKYQ AVTATLEEKR KEKAKMHYRK KKQILRLRKQ 180
AEKNVEKKIC KFTEVLKTNG LLV 203 
Gene Ontology
 GO:0015934; C:large ribosomal subunit; IEA:InterPro.
 GO:0030529; C:ribonucleoprotein complex; ISO:MGI.
 GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
 GO:0071346; P:cellular response to interferon-gamma; IDA:UniProtKB.
 GO:0017148; P:negative regulation of translation; IDA:UniProtKB.
 GO:0006412; P:translation; IEA:InterPro. 
Interpro
 IPR005822; Ribosomal_L13.
 IPR023563; Ribosomal_L13_CS.
 IPR023564; Ribosomal_L13_dom.
 IPR005755; Ribosomal_L13_euk/arc. 
Pfam
 PF00572; Ribosomal_L13 
SMART
  
PROSITE
 PS00783; RIBOSOMAL_L13 
PRINTS