CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-017366
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 E3 SUMO-protein ligase PIAS4 
Protein Synonyms/Alias
 PIASy; Protein inhibitor of activated STAT protein 4; Protein inhibitor of activated STAT protein gamma; PIAS-gamma 
Gene Name
 PIAS4 
Gene Synonyms/Alias
 PIASG 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
9AAELVEAKNMVMSFRubiquitination[1]
31LGFVGRSKSGLKHELubiquitination[1]
35GRSKSGLKHELVTRAsumoylation[2]
35GRSKSGLKHELVTRAubiquitination[1]
56DCSPELFKKIKELYEubiquitination[3]
57CSPELFKKIKELYETubiquitination[1]
59PELFKKIKELYETRYubiquitination[1]
69YETRYAKKNSEPAPQubiquitination[1]
114DYPVLYGKYLNGLGRacetylation[4]
114DYPVLYGKYLNGLGRubiquitination[1, 3, 5, 6, 7]
125GLGRLPAKTLKPEVRacetylation[4, 8]
125GLGRLPAKTLKPEVRubiquitination[1]
128RLPAKTLKPEVRLVKubiquitination[1, 8]
187RELQPGVKAVQVVLRubiquitination[1]
231PGYYPSNKPGVEPKRubiquitination[1, 6, 8]
294RLKTIGVKHPELCKAubiquitination[1]
300VKHPELCKALVKEKLubiquitination[1, 6]
306CKALVKEKLRLDPDSubiquitination[1]
330SLICPLVKMRLSVPCubiquitination[1, 6]
411WCPIRAEKERSCSPQubiquitination[1]
504KRRCPFQKGLVPAC*ubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] SUMO-1 modification of PIASy, an E3 ligase, is necessary for PIASy-dependent activation of Tcf-4.
 Ihara M, Yamamoto H, Kikuchi A.
 Mol Cell Biol. 2005 May;25(9):3506-18. [PMID: 15831457]
 [3] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [4] Lysine acetylation targets protein complexes and co-regulates major cellular functions.
 Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M.
 Science. 2009 Aug 14;325(5942):834-40. [PMID: 19608861]
 [5] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [6] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [7] Ubiquitin ligase substrate identification through quantitative proteomics at both the protein and peptide levels.
 Lee KA, Hammerle LP, Andrews PS, Stokes MP, Mustelin T, Silva JC, Black RA, Doedens JR.
 J Biol Chem. 2011 Dec 2;286(48):41530-8. [PMID: 21987572]
 [8] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
 Functions as an E3-type small ubiquitin-like modifier (SUMO) ligase, stabilizing the interaction between UBE2I and the substrate, and as a SUMO-tethering factor. Plays a crucial role as a transcriptional coregulation in various cellular pathways, including the STAT pathway, the p53/TP53 pathway, the Wnt pathway and the steroid hormone signaling pathway. Involved in gene silencing. Mediates sumoylation of CEBPA, PARK7, HERC2, MYB, TCF4 and RNF168. In Wnt signaling, represses LEF1 and enhances TCF4 transcriptional activities through promoting their sumoylations. 
Sequence Annotation
 DOMAIN 12 46 SAP.
 DOMAIN 119 279 PINIT.
 ZN_FING 311 388 SP-RING-type.
 MOTIF 20 24 LXXLL motif.
 MOD_RES 2 2 N-acetylalanine.
 MOD_RES 114 114 N6-acetyllysine.
 CROSSLNK 35 35 Glycyl lysine isopeptide (Lys-Gly)
 CROSSLNK 128 128 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 Acetylation; Complete proteome; DNA-binding; Isopeptide bond; Ligase; Metal-binding; Nucleus; Reference proteome; Repressor; Transcription; Transcription regulation; Ubl conjugation; Ubl conjugation pathway; Wnt signaling pathway; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 510 AA 
Protein Sequence
MAAELVEAKN MVMSFRVSDL QMLLGFVGRS KSGLKHELVT RALQLVQFDC SPELFKKIKE 60
LYETRYAKKN SEPAPQPHRP LDPLTMHSTY DRAGAVPRTP LAGPNIDYPV LYGKYLNGLG 120
RLPAKTLKPE VRLVKLPFFN MLDELLKPTE LVPQNNEKLQ ESPCIFALTP RQVELIRNSR 180
ELQPGVKAVQ VVLRICYSDT SCPQEDQYPP NIAVKVNHSY CSVPGYYPSN KPGVEPKRPC 240
RPINLTHLMY LSSATNRITV TWGNYGKSYS VALYLVRQLT SSELLQRLKT IGVKHPELCK 300
ALVKEKLRLD PDSEIATTGV RVSLICPLVK MRLSVPCRAE TCAHLQCFDA VFYLQMNEKK 360
PTWMCPVCDK PAPYDQLIID GLLSKILSEC EDADEIEYLV DGSWCPIRAE KERSCSPQGA 420
ILVLGPSDAN GLLPAPSVNG SGALGSTGGG GPVGSMENGK PGADVVDLTL DSSSSSEDEE 480
EEEEEEEDED EEGPRPKRRC PFQKGLVPAC 510 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:BHF-UCL.
 GO:0016363; C:nuclear matrix; IEA:Compara.
 GO:0005634; C:nucleus; IDA:UniProtKB.
 GO:0016605; C:PML body; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0019789; F:SUMO ligase activity; IMP:UniProtKB.
 GO:0008270; F:zinc ion binding; NAS:UniProtKB.
 GO:0032088; P:negative regulation of NF-kappaB transcription factor activity; IEA:Compara.
 GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEA:Compara.
 GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.
 GO:1902174; P:positive regulation of keratinocyte apoptotic process; ISS:BHF-UCL.
 GO:0033235; P:positive regulation of protein sumoylation; IDA:UniProtKB.
 GO:0016925; P:protein sumoylation; IMP:UniProtKB.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW. 
Interpro
 IPR027224; PIAS4.
 IPR023321; PINIT.
 IPR003034; SAP_dom.
 IPR004181; Znf_MIZ. 
Pfam
 PF14324; PINIT
 PF02891; zf-MIZ 
SMART
 SM00513; SAP 
PROSITE
 PS51466; PINIT
 PS50800; SAP
 PS51044; ZF_SP_RING 
PRINTS