CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-038623
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein Rdh9 
Protein Synonyms/Alias
  
Gene Name
 Rdh9 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
98VAATQWVKERVGNRGacetylation[1, 2]
98VAATQWVKERVGNRGubiquitination[3]
241IREIYGEKYLASYLKubiquitination[3]
248KYLASYLKRLNELDKacetylation[2]
Reference
 [1] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [2] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [3] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 317 AA 
Protein Sequence
MWLYLVALVG LWTLLRFFRE RQVVSHLQDK YVFITGCDSG FGNLLARQLD RRGMRVLAAC 60
LTEKGAEELR NKTSDRLETV ILDVTKTESI VAATQWVKER VGNRGLWGLV NNAGISIPSG 120
PNEWMKKQDF AHVLDVNLLG LIEVTLSMLP LVRKARGRVI NVASVLGRVS LCGGAYCISK 180
YGVEAFSDSL RRELSYFGVK VAIIEPGFFL TGVTSSARLC SNTQMLWDQT SSEIREIYGE 240
KYLASYLKRL NELDKRCNKD LSLVTDCMEH ALTACHPRTR YSAGWDAKLF YLPLSYLPTF 300
LVDALLYWTS LKPEKAL 317 
Gene Ontology
 GO:0004745; F:retinol dehydrogenase activity; IDA:MGI.
 GO:0042904; P:9-cis-retinoic acid biosynthetic process; IDA:MGI. 
Interpro
 IPR002198; DH_sc/Rdtase_SDR.
 IPR002347; Glc/ribitol_DH.
 IPR016040; NAD(P)-bd_dom.
 IPR020904; Sc_DH/Rdtase_CS. 
Pfam
 PF00106; adh_short 
SMART
  
PROSITE
 PS00061; ADH_SHORT 
PRINTS
 PR00081; GDHRDH.
 PR00080; SDRFAMILY.