CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-026296
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 RUN and SH3 domain-containing protein 1 
Protein Synonyms/Alias
  
Gene Name
 RUSC1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
74TGQLQEQKKGLLIAVubiquitination[1]
101AARNLVQKAQLGDSRubiquitination[1, 2]
301QSLRGTSKEAASDPSubiquitination[2, 3]
393ENENGALKSRRPSSWubiquitination[1, 2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [3] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 492 AA 
Protein Sequence
MPPTCSPGLR RQDWAPGRCA GLHLPPRAPS SPALQALAGQ AGVRSSWSFA GVPGAQRLWM 60
AEAQSGTGQL QEQKKGLLIA VSVSVDKIIS HFGAARNLVQ KAQLGDSRLS PDVGHLVLTT 120
LCPALHALVA DGLKPFRKDL ITGQRRSSPW SVVEASVKPG SSTRSLGTLY SQVSRLAPLS 180
SSRSRFHAFI LGLLNTKQLE LWFSSLQEDA GLLSLLYLPT GFFSLARGGC PSLSTELLLL 240
LQPLSVLTFH LDLLFEHHHH LPLGPPQAPA PPGPPPALQQ TMQAMLHFGG RLAQSLRGTS 300
KEAASDPSDS PNLPTPGSWW EQLTQASRVY ASGGTEGFPL SRWAPGRHGT AAEEGAQERP 360
LPTDEMAPGR GLWLGRLFGV PGGPAENENG ALKSRRPSSW LPPTVSVLAL VKRGAPPEMP 420
SPQELEASAP RMVQTHRAVR ALCDHTAARP DQLSFRRGEV LRVITTVDED WLRCGRDGME 480
GLVPVGYTSL VL 492 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:HPA. 
Interpro
 IPR004012; Run.
 IPR001452; SH3_domain. 
Pfam
 PF02759; RUN
 PF00018; SH3_1 
SMART
 SM00593; RUN
 SM00326; SH3 
PROSITE
 PS50826; RUN
 PS50002; SH3 
PRINTS