CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006894
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Vacuolar import and degradation protein 24 
Protein Synonyms/Alias
 Glucose-induced degradation protein 4 
Gene Name
 VID24 
Gene Synonyms/Alias
 GID4; YBR105C; YBR0834 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
13KVDSVAEKPKAVTSKubiquitination[1]
15DSVAEKPKAVTSKQSubiquitination[1]
20KPKAVTSKQSEQAASubiquitination[1, 2]
252GTTNAAKKLPPQQLPubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047
Functional Description
 Has a role in the negative regulation of gluconeogenesis. Required for both proteasome-dependent and vacuolar catabolite degradation of fructose-1,6-bisphosphatase (FBPase). Probably regulates FBPase targeting from the FBPase- containing vesicles to the vacuole. 
Sequence Annotation
 MOD_RES 27 27 Phosphoserine.  
Keyword
 Complete proteome; Cytoplasmic vesicle; Membrane; Phosphoprotein; Protein transport; Reference proteome; Transport; Ubl conjugation pathway. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 362 AA 
Protein Sequence
MINNPKVDSV AEKPKAVTSK QSEQAASPEP TPAPPVSRNQ YPITFNLTST APFHLHDRHR 60
YLQEQDLYKC ASRDSLSSLQ QLAHTPNGST RKKYIVEDQS PYSSENPVIV TSSYNHTVCT 120
NYLRPRMQFT GYQISGYKRY QVTVNLKTVD LPKKDCTSLS PHLSGFLSIR GLTNQHPEIS 180
TYFEAYAVNH KELGFLSSSW KDEPVLNEFK ATDQTDLEHW INFPSFRQLF LMSQKNGLNS 240
TDDNGTTNAA KKLPPQQLPT TPSADAGNIS RIFSQEKQFD NYLNERFIFM KWKEKFLVPD 300
ALLMEGVDGA SYDGFYYIVH DQVTGNIQGF YYHQDAEKFQ QLELVPSLKN KVESSDCSFE 360
FA 362 
Gene Ontology
 GO:0016023; C:cytoplasmic membrane-bounded vesicle; IDA:SGD.
 GO:0030659; C:cytoplasmic vesicle membrane; IEA:UniProtKB-SubCell.
 GO:0019898; C:extrinsic to membrane; IDA:SGD.
 GO:0034657; C:GID complex; IDA:SGD.
 GO:0045721; P:negative regulation of gluconeogenesis; IMP:SGD.
 GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:SGD.
 GO:0006623; P:protein targeting to vacuole; IMP:SGD.
 GO:0007039; P:vacuolar protein catabolic process; IMP:SGD.
 GO:0051469; P:vesicle fusion with vacuole; IMP:SGD. 
Interpro
 IPR018618; Vacuolar_import/degrad_Vid24. 
Pfam
 PF09783; Vac_ImportDeg 
SMART
  
PROSITE
  
PRINTS