CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-023117
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Isobutyryl-CoA dehydrogenase, mitochondrial 
Protein Synonyms/Alias
 Activator-recruited cofactor 42 kDa component; ARC42; Acyl-CoA dehydrogenase family member 8; ACAD-8 
Gene Name
 ACAD8 
Gene Synonyms/Alias
 ARC42; IBD 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
144GNEEQRHKFCPPLCTubiquitination[1]
177ASLLTSAKKQGDHYIubiquitination[1]
178SLLTSAKKQGDHYILubiquitination[1]
213RTGGPGPKGISCIVVubiquitination[1]
232PGLSFGKKEKKVGWNubiquitination[1]
235SFGKKEKKVGWNSQPubiquitination[1]
303RDHLNVRKQFGEPLAubiquitination[1]
345VALQEERKDAVALCSubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
 Has very high activity toward isobutyryl-CoA. Is an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Plays a role in transcriptional coactivation within the ARC complex. 
Sequence Annotation
 NP_BIND 158 167 FAD.
 NP_BIND 191 193 FAD.
 NP_BIND 312 313 FAD; shared with dimeric partner.
 NP_BIND 371 375 FAD; shared with dimeric partner.
 NP_BIND 400 402 FAD.
 REGION 274 277 Substrate binding.
 ACT_SITE 398 398 Proton acceptor.
 BINDING 167 167 Substrate; via carbonyl oxygen.
 BINDING 302 302 FAD; shared with dimeric partner.
 BINDING 399 399 Substrate; via amide nitrogen.
 BINDING 410 410 Substrate.  
Keyword
 3D-structure; Activator; Branched-chain amino acid catabolism; Complete proteome; Direct protein sequencing; Disease mutation; FAD; Flavoprotein; Mitochondrion; Oxidoreductase; Reference proteome; Transcription; Transcription regulation; Transit peptide. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 415 AA 
Protein Sequence
MLWSGCRRFG ARLGCLPGGL RVLVQTGHRS LTSCIDPSMG LNEEQKEFQK VAFDFAAREM 60
APNMAEWDQK ELFPVDVMRK AAQLGFGGVY IQTDVGGSGL SRLDTSVIFE ALATGCTSTT 120
AYISIHNMCA WMIDSFGNEE QRHKFCPPLC TMEKFASYCL TEPGSGSDAA SLLTSAKKQG 180
DHYILNGSKA FISGAGESDI YVVMCRTGGP GPKGISCIVV EKGTPGLSFG KKEKKVGWNS 240
QPTRAVIFED CAVPVANRIG SEGQGFLIAV RGLNGGRINI ASCSLGAAHA SVILTRDHLN 300
VRKQFGEPLA SNQYLQFTLA DMATRLVAAR LMVRNAAVAL QEERKDAVAL CSMAKLFATD 360
ECFAICNQAL QMHGGYGYLK DYAVQQYVRD SRVHQILEGS NEVMRILISR SLLQE 415 
Gene Ontology
 GO:0005759; C:mitochondrial matrix; TAS:Reactome.
 GO:0003995; F:acyl-CoA dehydrogenase activity; EXP:Reactome.
 GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
 GO:0009083; P:branched-chain amino acid catabolic process; TAS:Reactome.
 GO:0034641; P:cellular nitrogen compound metabolic process; TAS:Reactome.
 GO:0006629; P:lipid metabolic process; TAS:ProtInc.
 GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
 GO:0006574; P:valine catabolic process; IEA:UniProtKB-UniPathway. 
Interpro
 IPR006089; Acyl-CoA_DH_CS.
 IPR006092; Acyl-CoA_DH_N.
 IPR006090; Acyl-CoA_Oxase/DH_1.
 IPR006091; Acyl-CoA_Oxase/DH_cen-dom.
 IPR009075; AcylCo_DH/oxidase_C.
 IPR013786; AcylCoA_DH/ox_N.
 IPR009100; AcylCoA_DH/oxidase. 
Pfam
 PF00441; Acyl-CoA_dh_1
 PF02770; Acyl-CoA_dh_M
 PF02771; Acyl-CoA_dh_N 
SMART
  
PROSITE
 PS00072; ACYL_COA_DH_1
 PS00073; ACYL_COA_DH_2 
PRINTS