CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022479
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 3 
Protein Synonyms/Alias
 3-hydroxyacyl-CoA dehydratase 3; HACD3; Butyrate-induced protein 1; B-ind1; hB-ind1; Protein tyrosine phosphatase-like protein PTPLAD1; Protein-tyrosine phosphatase-like A domain-containing protein 1 
Gene Name
 PTPLAD1 
Gene Synonyms/Alias
 BIND1; HACD3 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
43TENVLHFKAQGHGAKubiquitination[1, 2, 3]
98ERLTKQEKRPLFLAPubiquitination[1, 3]
130KEEERLNKLRLESEGubiquitination[2]
319FTLPYPVKIKVRFSFubiquitination[1, 3]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [3] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 Responsible for the dehydration step in very long-chain fatty acid (VLCFA) synthesis. Involved in Rac1-signaling pathways leading to the modulation of gene expression. 
Sequence Annotation
 DOMAIN 5 94 CS.
 ACT_SITE 286 286 By similarity.
 ACT_SITE 293 293 By similarity.
 MOD_RES 114 114 Phosphoserine.  
Keyword
 Coiled coil; Complete proteome; Endoplasmic reticulum; Fatty acid biosynthesis; Fatty acid metabolism; Lipid biosynthesis; Lipid metabolism; Lyase; Membrane; Phosphoprotein; Polymorphism; Reference proteome; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 362 AA 
Protein Sequence
MENQVLTPHV YWAQRHRELY LRVELSDVQN PAISITENVL HFKAQGHGAK GDNVYEFHLE 60
FLDLVKPEPV YKLTQRQVNI TVQKKVSQWW ERLTKQEKRP LFLAPDFDRW LDESDAEMEL 120
RAKEEERLNK LRLESEGSPE TLTNLRKGYL FMYNLVQFLG FSWIFVNLTV RFCILGKESF 180
YDTFHTVADM MYFCQMLAVV ETINAAIGVT TSPVLPSLIQ LLGRNFILFI IFGTMEEMQN 240
KAVVFFVFYL WSAIEIFRYS FYMLTCIDMD WKVLTWLRYT LWIPLYPLGC LAEAVSVIQS 300
IPIFNETGRF SFTLPYPVKI KVRFSFFLQI YLIMIFLGLY INFRHLYKQR RRRYGQKKKK 360
IH 362 
Gene Ontology
 GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005096; F:GTPase activator activity; TAS:ProtInc.
 GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
 GO:0007257; P:activation of JUN kinase activity; TAS:ProtInc.
 GO:0006633; P:fatty acid biosynthetic process; IEA:UniProtKB-KW.
 GO:0007249; P:I-kappaB kinase/NF-kappaB cascade; TAS:ProtInc.
 GO:0016601; P:Rac protein signal transduction; NAS:UniProtKB.
 GO:0007266; P:Rho protein signal transduction; IEA:Compara. 
Interpro
 IPR007052; CS-like_domain.
 IPR017447; CS_domain.
 IPR008978; HSP20-like_chaperone.
 IPR007482; Tyr_Pase-like_PTPLA. 
Pfam
 PF04969; CS
 PF04387; PTPLA 
SMART
  
PROSITE
 PS51203; CS 
PRINTS