CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003736
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 40S ribosomal protein S6-A 
Protein Synonyms/Alias
 RP9; S10; YS4 
Gene Name
 RPS6A 
Gene Synonyms/Alias
 RPS101; RPS10B; YPL090C; LPG18C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
2******MKLNISYPVubiquitination[1]
14YPVNGSQKTFEIDDEubiquitination[1]
46EAVGDEFKGYVFKISacetylation[2]
46EAVGDEFKGYVFKISubiquitination[1]
51EFKGYVFKISGGNDKacetylation[2]
58KISGGNDKQGFPMKQubiquitination[1]
64DKQGFPMKQGVLLPTubiquitination[1]
79RIKLLLTKNVSCYRPacetylation[2]
79RIKLLLTKNVSCYRPubiquitination[1]
116LALVIVKKGEQELEGacetylation[3]
116LALVIVKKGEQELEGubiquitination[1]
131LTDTTVPKRLGPKRAubiquitination[1]
143KRANNIRKFFGLSKEacetylation[2]
143KRANNIRKFFGLSKEubiquitination[1]
149RKFFGLSKEDDVRDFacetylation[2]
149RKFFGLSKEDDVRDFubiquitination[1]
167REVTKGEKTYTKAPKacetylation[2]
171KGEKTYTKAPKIQRLacetylation[2]
171KGEKTYTKAPKIQRLubiquitination[1]
214EYAQLLAKRLSERKAacetylation[2]
214EYAQLLAKRLSERKAubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301]
 [2] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919]
 [3] Preparative peptide isoelectric focusing as a tool for improving the identification of lysine-acetylated peptides from complex mixtures.
 Xie H, Bandhakavi S, Roe MR, Griffin TJ.
 J Proteome Res. 2007 May;6(5):2019-26. [PMID: 17397211
Functional Description
 Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. 
Sequence Annotation
 MOD_RES 163 163 Phosphothreonine.  
Keyword
 3D-structure; Complete proteome; Cytoplasm; Direct protein sequencing; Nucleus; Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein; Ribosome biogenesis; rRNA processing. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 236 AA 
Protein Sequence
MKLNISYPVN GSQKTFEIDD EHRIRVFFDK RIGQEVDGEA VGDEFKGYVF KISGGNDKQG 60
FPMKQGVLLP TRIKLLLTKN VSCYRPRRDG ERKRKSVRGA IVGPDLAVLA LVIVKKGEQE 120
LEGLTDTTVP KRLGPKRANN IRKFFGLSKE DDVRDFVIRR EVTKGEKTYT KAPKIQRLVT 180
PQRLQRKRHQ RALKVRNAQA QREAAAEYAQ LLAKRLSERK AEKAEIRKRR ASSLKA 236 
Gene Ontology
 GO:0030686; C:90S preribosome; IDA:SGD.
 GO:0022627; C:cytosolic small ribosomal subunit; IDA:SGD.
 GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
 GO:0032040; C:small-subunit processome; IDA:SGD.
 GO:0003735; F:structural constituent of ribosome; IDA:SGD.
 GO:0002181; P:cytoplasmic translation; IC:SGD.
 GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IGI:SGD. 
Interpro
 IPR014401; Ribosomal_S6_euk.
 IPR001377; Ribosomal_S6e.
 IPR018282; Ribosomal_S6e_CS. 
Pfam
 PF01092; Ribosomal_S6e 
SMART
  
PROSITE
 PS00578; RIBOSOMAL_S6E 
PRINTS