CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-017725
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RAD52 motif-containing protein 1 
Protein Synonyms/Alias
 RAD52 homolog B 
Gene Name
 RDM1 
Gene Synonyms/Alias
 RAD52B 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
100VRLGTRHKAVQHQALubiquitination[1]
113ALALNSSKCQELANYubiquitination[1]
133GCSKRIIKLQELSDLubiquitination[1, 2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983
Functional Description
 May confer resistance to the antitumor agent cisplatin. Binds to DNA and RNA. 
Sequence Annotation
 DOMAIN 15 98 RRM.
 REGION 1 92 Necessary for nuclear localization and
 REGION 90 133 Necessary for nuclear and nucleolar  
Keyword
 Alternative promoter usage; Alternative splicing; Complete proteome; Cytoplasm; DNA-binding; Nucleus; Polymorphism; Reference proteome; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 284 AA 
Protein Sequence
MAELVPFAVP IESDKTLLVW ELSSGPTAEA LHHSLFTAFS QFGLLYSVRV FPNAAVAHPG 60
FYAVIKFYSA RAAHRAQKAC DRKQLFQKSP VKVRLGTRHK AVQHQALALN SSKCQELANY 120
YFGFNGCSKR IIKLQELSDL EERENEDSMV PLPKQSLKFF CALEVVLPSC DCRSPGIGLV 180
EEPMDKVEEG PLSFLMKRKT AQKLAIQKAL SDAFQKLLIV VLESGKIAVE YRPSEDIVGV 240
RCEEELHGLI QVPCSPWKQY GQEEEGYLSD FSLEEEEFRL PELD 284 
Gene Ontology
 GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.
 GO:0005737; C:cytoplasm; IDA:HPA.
 GO:0005730; C:nucleolus; IDA:HPA.
 GO:0016605; C:PML body; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0000166; F:nucleotide binding; IEA:InterPro.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0006310; P:DNA recombination; IEA:InterPro.
 GO:0006281; P:DNA repair; IEA:InterPro. 
Interpro
 IPR012677; Nucleotide-bd_a/b_plait.
 IPR007232; Rad52_Rad22.
 IPR000504; RRM_dom. 
Pfam
 PF04098; Rad52_Rad22
 PF00076; RRM_1 
SMART
  
PROSITE
 PS50102; RRM 
PRINTS