CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041564
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein Psmc6 
Protein Synonyms/Alias
 RCG61291 
Gene Name
 Psmc6 
Gene Synonyms/Alias
 LOC100365869; rCG_61291 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
34RKKLLEHKEIDGRLKubiquitination[1]
48KELREQLKELTKQYEacetylation[2]
76QIVGEVLKQLTEEKFacetylation[2]
82LKQLTEEKFIVKATNacetylation[2]
220VSSSIVDKYIGESARacetylation[2]
220VSSSIVDKYIGESARubiquitination[1]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113]
 [2] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 ATP-binding; Complete proteome; Nucleotide-binding; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 403 AA 
Protein Sequence
MALPGIPYER RLLIMADPRD KALQDYRKKL LEHKEIDGRL KELREQLKEL TKQYEKSEND 60
LKALQSVGQI VGEVLKQLTE EKFIVKATNG PRYVVGCRRQ LDKSKLKPGT RVALDMTTLT 120
IMRYLPREVD PLVYNMSHED PGNVSYSEIG GLSEQIRELR EVIELPLTNP ELFQRVGIIP 180
PKGCLLYGPP GTGKTLLARA VASQLDCNFL KVVSSSIVDK YIGESARLIR EMFNYARDHQ 240
PCIIFMDEID AIGGRRFSEG TSADREIQRT LMELLNQMDG FDTLHRVKMI MATNRPDTLD 300
PALLRPGRLD RKIHIDLPNE QARLDILKIH AGPITKHGEI DYEAIVKLSD GFNGADLRNV 360
CTEAGMFAIR ADHDFVVQED FMKAVRKVAD SKKLESKLDY KPV 403 
Gene Ontology
 GO:0031597; C:cytosolic proteasome complex; IDA:RGD.
 GO:0016234; C:inclusion body; IDA:RGD.
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0005886; C:plasma membrane; IEA:Compara.
 GO:0022624; C:proteasome accessory complex; IEA:Compara.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
 GO:0090261; P:positive regulation of inclusion body assembly; IMP:RGD.
 GO:0030163; P:protein catabolic process; IEA:InterPro. 
Interpro
 IPR005937; 26S_Psome_P45.
 IPR003593; AAA+_ATPase.
 IPR003959; ATPase_AAA_core.
 IPR003960; ATPase_AAA_CS.
 IPR027417; P-loop_NTPase. 
Pfam
 PF00004; AAA 
SMART
 SM00382; AAA 
PROSITE
 PS00674; AAA 
PRINTS