CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035044
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein Wdhd1 
Protein Synonyms/Alias
 WD repeat and HMG-box DNA binding protein 1 (Predicted) 
Gene Name
 Wdhd1 
Gene Synonyms/Alias
 Wdhd1_predicted; rCG_61246 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
663IREHCKGKSDHYWVVacetylation[1]
952NEKSPVIKPLIPKPRacetylation[1]
1115KLSAFAFKQE*****acetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome; Repeat; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1117 AA 
Protein Sequence
MPAIQKPMRY GHTEGHTEVC FDDSGSFIVT CGSDGDVRMW EDLDDDDPKS VNVGEKAFSC 60
ALKNGKLVTA VSNNTVQVYT FPEGAPDGIL TRFTTNANHV VFNGDGTKIA AGSSDFLVKV 120
VDVMDNSQQQ TFRGHDAPVL SLSFDPKDVF LASASCDGTV RVWNISDQTC AASWPVLRKS 180
NDVVNSESIC RLAWQPKTGK FLAVPVEKSV KLYRRETWSN PFDLSDSSVT QTLNIVTWSP 240
CGQYLAAGAI NGLIVVWNVE TKECMERVKH EKGYAICGLA WHPTYSRICY TDVEGNLGIL 300
ENVCDLSGKL SSNKVPSGVE KDYSDLFDGD DTSSAGDFLN DNAVEIPSFS KGIRNEEDDN 360
DDLMLAADHV LGDDENSVDV TMLRNDLHRE EGEDRQASSL HSLPLVKSQR PLYDGPMPTP 420
RQKPFQPSST PLHLTHRFMA WNSVGIIRCY NDDQDSAIDV EFHDTSIHHA THLSNAFNYT 480
MGSLSHEAVL LACESADELA SKLHCLHFSS WDSSKEWIVD MPENEDIEAI CLGLGWAAAA 540
TSALLLRLFT IGGVQKEVFC LPGPVVSMAG HGEQLCIVYH RGTGFDGDQC LGVQLLELGR 600
KKKQVLHGDP LPLTRKSYLT WLGFSAEGTP CYVDSEGCVR MLNRGLGNTW TPVCNIREHC 660
KGKSDHYWVV GIHENPQQLR CIPCKGSRFP PTLPRPAVAI LPFKLPYCQT STEKGQMEEQ 720
FWHSVLFHNY LDYLAENGYD YEESIKKQAV KEQQELLMKM LALSCKLERE FRCVELADLM 780
TQNAVHLAIK YASRSRKLIL AQKLSELAAE KAAELAEIQT EEREEDFRER LNAGYSHTTT 840
EWSQPRVRSQ VEEDAEDRED TVSEGNPEPQ NHGQNLIQSA NSSDTPAMKS GAVFSSSQGR 900
VNPFKVLVSS KEPAVSVNAT RSANILDNMN KLSRKSTSFN RVANNEKSPV IKPLIPKPRC 960
KQASAASYFQ KRTSQAEKTE EVKENPKSSS SEAPAVCLQN SEVQRPKTGF QMWLEENRSH 1020
IMSDNPDISD EADIIKEGMI RFRVLSAEER KEWTNKAKGG TASDGAEAKK RKRGVSEICE 1080
TEKQEEAVKE NLELSKKQKA LDLSTNQKLS AFAFKQE 1117 
Gene Ontology
 GO:0000775; C:chromosome, centromeric region; IEA:Compara.
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0003682; F:chromatin binding; IEA:Compara.
 GO:0003723; F:RNA binding; IEA:Compara.
 GO:0070829; P:heterochromatin maintenance; IEA:Compara.
 GO:0033044; P:regulation of chromosome organization; IEA:Compara.
 GO:0006396; P:RNA processing; IEA:Compara. 
Interpro
 IPR022100; DUF3639.
 IPR009071; HMG_box_dom.
 IPR013979; TIF_beta_prop-like.
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR019775; WD40_repeat_CS.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF12341; DUF3639
 PF08662; eIF2A
 PF00505; HMG_box
 PF00400; WD40 
SMART
 SM00398; HMG
 SM00320; WD40 
PROSITE
 PS50118; HMG_BOX_2
 PS00678; WD_REPEATS_1
 PS50082; WD_REPEATS_2
 PS50294; WD_REPEATS_REGION 
PRINTS