CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011790
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Cytosine deaminase 
Protein Synonyms/Alias
 Cytosine aminohydrolase 
Gene Name
 FCY1 
Gene Synonyms/Alias
 YPR062W; YP9499.17 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
27EEAALGYKEGGVPIGubiquitination[1, 2]
41GGCLINNKDGSVLGRubiquitination[2]
56GHNMRFQKGSATLHGubiquitination[2]
Reference
 [1] Sites of ubiquitin attachment in Saccharomyces cerevisiae.
 Starita LM, Lo RS, Eng JK, von Haller PD, Fields S.
 Proteomics. 2012 Jan;12(2):236-40. [PMID: 22106047]
 [2] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Converts cytosine to uracil or 5-methylcytosine to thymine by deaminating carbon number 4. 
Sequence Annotation
 ACT_SITE 64 64 Proton donor.
 METAL 62 62 Zinc; catalytic.
 METAL 91 91 Zinc; catalytic.
 METAL 94 94 Zinc; catalytic.
 BINDING 51 51 Substrate.
 BINDING 155 155 Substrate.  
Keyword
 3D-structure; Complete proteome; Hydrolase; Metal-binding; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 158 AA 
Protein Sequence
MVTGGMASKW DQKGMDIAYE EAALGYKEGG VPIGGCLINN KDGSVLGRGH NMRFQKGSAT 60
LHGEISTLEN CGRLEGKVYK DTTLYTTLSP CDMCTGAIIM YGIPRCVVGE NVNFKSKGEK 120
YLQTRGHEVV VVDDERCKKI MKQFIDERPQ DWFEDIGE 158 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:SGD.
 GO:0005634; C:nucleus; IDA:SGD.
 GO:0004131; F:cytosine deaminase activity; IDA:SGD.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0046087; P:cytidine metabolic process; IMP:SGD.
 GO:0019858; P:cytosine metabolic process; IMP:SGD.
 GO:0008655; P:pyrimidine-containing compound salvage; IMP:SGD.
 GO:0044206; P:UMP salvage; IEA:UniProtKB-UniPathway. 
Interpro
 IPR016192; APOBEC/CMP_deaminase_Zn-bd.
 IPR002125; CMP_dCMP_Zn-bd.
 IPR016193; Cytidine_deaminase-like. 
Pfam
 PF00383; dCMP_cyt_deam_1 
SMART
  
PROSITE
 PS00903; CYT_DCMP_DEAMINASES 
PRINTS