CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-022763
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Pre-mRNA-processing factor 40 homolog A 
Protein Synonyms/Alias
 Formin-binding protein 11; FBP-11; Formin-binding protein 3 
Gene Name
 Prpf40a 
Gene Synonyms/Alias
 Fbp11; Fnbp3 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
714TLDAGNIKLAFNSLLubiquitination[1]
723AFNSLLEKAEAREREubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 Binds to WASL/N-WASP and suppresses its translocation from the nucleus to the cytoplasm, thereby inhibiting its cytoplasmic function. Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the control of cell shape and migration. May play a role in cytokinesis. May be involved in pre-mRNA splicing. 
Sequence Annotation
 DOMAIN 140 173 WW 1.
 DOMAIN 181 214 WW 2.
 DOMAIN 389 443 FF 1.
 DOMAIN 456 510 FF 2.
 DOMAIN 523 583 FF 3.
 DOMAIN 603 663 FF 4.
 DOMAIN 668 723 FF 5.
 DOMAIN 738 795 FF 6.
 MOD_RES 36 36 Phosphoserine.
 MOD_RES 151 151 Phosphoserine (By similarity).
 MOD_RES 196 196 N6-acetyllysine (By similarity).
 MOD_RES 369 369 Phosphothreonine (By similarity).
 MOD_RES 824 824 Phosphoserine.
 MOD_RES 826 826 Phosphoserine.
 MOD_RES 828 828 Phosphoserine.
 MOD_RES 830 830 Phosphoserine.
 MOD_RES 879 879 Phosphoserine.
 MOD_RES 881 881 Phosphoserine.
 MOD_RES 884 884 Phosphoserine.
 MOD_RES 928 928 Phosphothreonine.
 MOD_RES 929 929 Phosphoserine.
 MOD_RES 931 931 Phosphoserine.
 MOD_RES 934 934 Phosphoserine.  
Keyword
 Acetylation; Alternative splicing; Complete proteome; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 953 AA 
Protein Sequence
MRPGTGAERG GLMVSEMESQ PPSRGPGDGE RRLSGSNLCS SSWVSADGFL RRRPSMGHPG 60
MHYAPMGMHP MGQRANMPPV PHGMMPQMMP PMGGPPMGQM PGMMSSVMSG MMMSHMSQAS 120
MQPALPPGVN SMDVAAGAAS GAKSMWTEHK SPDGRTYYYN TETKQSTWEK PDDLKTPAEQ 180
LLSKCPWKEY KSDSGKPYYY NSQTKESRWA KPKELEDLEG YQNTIVAGGL ITKSNLHAMI 240
KAEESSKQEE CTTASTAPVP TTEIPTTMST MAAAEAAAAV VAAAAAAAAA ANANTSTTPT 300
NTVGSVPVAP EPEVTSIVAT AVDNENTVTV STEEQAQLAN TTAIQDLSGD ISSNTGEEPA 360
KQETVSDFTP KKEEEESQPA KKTYTWNTKE EAKQAFKELL KEKRVPSNAS WEQAMKMIIN 420
DPRYSALAKL SEKKQAFNAY KVQTEKEEKE EARSKYKEAK ESFQRFLENH EKMTSTTRYK 480
KAEQMFGEME VWNAISERDR LEIYEDVLFF LSKKEKEQAK QLRKRNWEAL KNILDNMANV 540
TYSTTWSEAQ QYLMDNPTFA EDEELQNMDK EDALICFEEH IRALEKEEEE EKQKTLLRER 600
RRQRKNRESF QIFLDELHEH GQLHSMSSWM ELYPTISSDI RFTNMLGQPG STALDLFKFY 660
VEDLKARYHD EKKIIKDILK DKGFVVEVNT TFEDFVAIIS STKRSTTLDA GNIKLAFNSL 720
LEKAEARERE REKEEARKMK RKESAFKSML KQATPPIELD AVWEDIRERF VKEPAFEDIT 780
LESERKRIFK DFMHVLEHEC QHHHSKNKKH SKKSKKHHRK RSRSRSGSES DDDDSHSKKK 840
RQRSESHSAS ERSSSAESER SYKKSKKHKK KSKKRRHKSD SPESDTEREK DKKEKDRDSE 900
KDRSRQRSES KHKSPKKKTG KDSGNWDTSG SELSEGELEK RRRTLLEQLD DDQ 953 
Gene Ontology
 GO:0016363; C:nuclear matrix; IDA:UniProtKB.
 GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
 GO:0070064; F:proline-rich region binding; IDA:MGI.
 GO:0016477; P:cell migration; ISS:UniProtKB.
 GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.
 GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
 GO:0008360; P:regulation of cell shape; ISS:UniProtKB.
 GO:0032465; P:regulation of cytokinesis; ISS:UniProtKB.
 GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. 
Interpro
 IPR002713; FF_domain.
 IPR001202; WW_dom. 
Pfam
 PF01846; FF
 PF00397; WW 
SMART
 SM00441; FF
 SM00456; WW 
PROSITE
 PS51676; FF
 PS01159; WW_DOMAIN_1
 PS50020; WW_DOMAIN_2 
PRINTS