CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-008590
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Vacuolar import and degradation protein 30 
Protein Synonyms/Alias
 Glucose-induced degradation protein 1 
Gene Name
 VID30 
Gene Synonyms/Alias
 GID1; YGL227W 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
293RVSSGNDKNDNEATNubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Has a role in the negative regulation of gluconeogenesis. Required for both proteasome-dependent and vacuolar catabolite degradation of fructose-1,6-bisphosphatase (FBPase). 
Sequence Annotation
 DOMAIN 390 592 B30.2/SPRY.
 DOMAIN 710 742 LisH.
 DOMAIN 769 826 CTLH.
 MOD_RES 147 147 Phosphoserine.
 MOD_RES 246 246 Phosphoserine.
 MOD_RES 248 248 Phosphoserine.
 MOD_RES 277 277 Phosphoserine.  
Keyword
 Complete proteome; Cytoplasm; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation pathway. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 958 AA 
Protein Sequence
MSEYMDDVDR EFINCLFPSY LLQQPVAYDL WILYLQHRKL FHKLKNTNLI NADENPTGVG 60
MGRTKLTALT RKEIWSKLMN LGVLGTISFE AVNDDYLIQV YKYFYPDVND FTLRFGVKDS 120
NKNSVRVMKA SSDMRKNAQE LLEPVLSERE MALNSNTSLE NDRNDDDDDD DDDDDDDDDD 180
DDDDDESDLE SLEGEVDTDT DDNNEGDGSD NHEEGGEEGS RGADADVSSA QQRAERVADP 240
WIYQRSRSAI NIETESRNLW DTSDKNSGLQ YYPPDQSPSS SFSSPRVSSG NDKNDNEATN 300
VLSNSGSKKK NSMIPDIYKI LGYFLPSRWQ AQPNNSLQLS QDGITHLQPN PDYHSYMTYE 360
RSSASSASTR NRLRTSFENS GKVDFAVTWA NKSLPDNKLT IFYYEIKVLS VTSTESAENS 420
NIVIGYKLVE NELMEATTKK SVSRSSVAGS SSSLGGSNNM SSNRVPSTSF TMEGTQRRDY 480
IYEGGVSAMS LNVDGSINKC QKYGFDLNVF GYCGFDGLIT NSTEQSKEYA KPFGRDDVIG 540
CGINFIDGSI FFTKNGIHLG NAFTDLNDLE FVPYVALRPG NSIKTNFGLN EDFVFDIIGY 600
QDKWKSLAYE HICRGRQMDV SIEEFDSDES EEDETENGPE ENKSTNVNED LMDIDQEDGA 660
AGNKDTKKLN DEKDNNLKFL LGEDNRFIDG KLVRPDVNNI NNLSVDDGSL PNTLNVMIND 720
YLIHEGLVDV AKGFLKDLQK DAVNVNGQHS ESKDVIRHNE RQIMKEERMV KIRQELRYLI 780
NKGQISKCIN YIDNEIPDLL KNNLELVFEL KLANYLVMIK KSSSKDDDEI ENLILKGQEL 840
SNEFIYDTKI PQSLRDRFSG QLSNVSALLA YSNPLVEAPK EISGYLSDEY LQERLFQVSN 900
NTILTFLHKD SECALENVIS NTRAMLSTLL EYNAFGSTNS SDPRYYKAIN FDEDVLNL 958 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:SGD.
 GO:0034657; C:GID complex; IDA:SGD.
 GO:0005634; C:nucleus; IDA:SGD.
 GO:0045721; P:negative regulation of gluconeogenesis; IMP:SGD.
 GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:SGD.
 GO:0006808; P:regulation of nitrogen utilization; IMP:SGD.
 GO:0007039; P:vacuolar protein catabolic process; IMP:SGD. 
Interpro
 IPR001870; B30.2/SPRY.
 IPR008985; ConA-like_lec_gl_sf.
 IPR013144; CRA_dom.
 IPR024964; CTLH/CRA.
 IPR006595; CTLH_C.
 IPR006594; LisH_dimerisation.
 IPR018355; SPla/RYanodine_receptor_subgr.
 IPR003877; SPRY_rcpt. 
Pfam
 PF10607; CLTH
 PF00622; SPRY 
SMART
 SM00757; CRA
 SM00668; CTLH
 SM00667; LisH
 SM00449; SPRY 
PROSITE
 PS50188; B302_SPRY
 PS50897; CTLH
 PS50896; LISH 
PRINTS